Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq510 428 6e-115 >seq510 Length=157725 Score = 428 bits (474), Expect = 6e-115 Identities = 1385/2136 (65%), Gaps = 41/2136 (2%) Strand=Plus/Minus Query 70792 TTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCT 70851 ||||| | ||||| ||||| | | || || |||| || | | |||||||| || Sbjct 74048 TTGTCAATAGTAAATTGAATAGCGGCAGAAGCAGCTTGAGTTCTCAAGTAGTACATACCA 73989 Query 70852 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAGG 70910 || || | ||| |||| |||||||| |||||||| || | ||| |||| | || Sbjct 73988 GTCTTCAAACCTTTCTTCCAACCGTAAAAGTGCATACTTGTCAATTTACCCATAGTT-GG 73930 Query 70911 ATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 70970 || ||||||||||||| || ||| |||||| ||||| || | || || ||||| Sbjct 73929 TTCTTTAATGTGAATATTCAAAGATTGAGATTGATCAATGAAAGCAGCTCTATCAGCAGC 73870 Query 70971 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATC 71030 ||| | ||||| |||||||| |||||||||| ||| || || | || || || Sbjct 73869 CATATCAATGATGTGCTTTTGTGAGATTTCCCAAACAGTCTTGTACAAAGCTTTGATTTC 73810 Query 71031 TTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGAT 71087 ||||| | ||||| | | ||||| || ||| | | |||||| || | || || Sbjct 73809 ATCTGGGATGTTTGGCAAACTTTGAATAGAACCATTGTTGGAAATAATATTACTCTTCAT 73750 Query 71088 CTCTTCATTCCATAATTTTCTC---TCGGTTAAAACTCTAAGGAGATGAGGATTAACTAC 71144 | |||||||| | | | | || |||| || | | | | || || || | Sbjct 73749 AGCATCATTCCAGA---TACCCAAGTCAACTAAATCTTTCAACAAGTATGGGTTGACAAT 73693 Query 71145 TTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGA 71204 ||| ||||| |||| ||| ||||| | | |||||| || || || ||||| | | Sbjct 73692 TTGGAATTCACCAGCCAAGACTCTTCTGGAGTAAATGTTGGAAGTGTAAGGTTCGAAACA 73633 Query 71205 CTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACT 71264 ||||| || ||||||||||||| ||| |||||||| ||||| || || ||||| | Sbjct 73632 TTCATTGTTACCCAAAATTTGAGAAGTAGATGCAGTTGGCATTGGAGCAACCAACAAGGA 73573 Query 71265 ATTTCTAAGACCATGTGATCGG--ATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCC 71322 ||||| | ||||||| | || || || | ||| | || ||||||| ||| | || Sbjct 73572 GTTTCTCAAACCATGT--TTGGCCATGTTTTGTTTCAAAGTATCCCAATCCCATAATTCA 73515 Query 71323 GATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCA 71382 | |||| | || | ||| || |||| Sbjct 73514 GTTGGTTTTCTGTTCCACAAATCAAATTGTAACAAACCTTGGGAAGCTGGAGAGCCTGGG 73455 Query 71383 TATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAA 71442 || | || || | ||||||| ||| || | |||| | || | || ||| | Sbjct 73454 TAACTTTCATAAGCACCTTCTTCTTCAGCCAATTCAATGGAAGATTCAACAGCAGCATGA 73395 Query 71443 TAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAA 71502 ||||||||||||||||| | | || | ||| ||||| | ||| ||||| | Sbjct 73394 TAAATGGTTTCGAAAATTTGAATGTTTAATTCTCTAGCTTCTTGAGAATCGAATGGCAAT 73335 Query 71503 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTC 71562 | || ||||| || || ||||| |||||||| || | | || ||||| |||||| Sbjct 73334 CTCAATGTCATAAAGGCATCAGCTAAACCTTGAACACCCAATGCAATTGGTCTATGTCTC 73275 Query 71563 TTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 71622 | ||||| ||||||||||||||| || || || ||| || |||| | | || | Sbjct 73274 ATGTTAGATTTTTCAGCTTCTGGAACTGGGTAGTAGTTACGGTCAATAACTCTGTTCAAG 73215 Query 71623 TTTCTGACTATTA-CTTTGACCACATCCTTTAGTTTGAGAAAAT-----CAAATC----T 71672 || | || || | |||| || || | || ||| ||| | ||| | | Sbjct 73214 TTAC-GAGTAACAACTTTAGTAACTTCATGTAATTTATCAAAGTTGTACCAAGTACTGTT 73156 Query 71673 CCCATCTATT---ACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTC 71729 |||| || ||||| | ||| |||| ||| |||| |||||||| || || || Sbjct 73155 TTCATCATTTTCAACAAAAGCAGGCAATGCAATAGAAGCCAAGTTACAAACAGCAACTTC 73096 Query 71730 ATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAA 71789 || | | | | ||||| | ||||||| || | ||| | | ||||| || || Sbjct 73095 ATCTGGAGCAGAATATTCAACAATTTCACAACACAAGTTAGAAGATTTGATAACACCCAA 73036 Query 71790 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGT 71849 || | ||| || |||| ||||||| ||||| ||||| | || || |||||||| || Sbjct 73035 GTTCTTTTGGTTGGTCTTGGTGTTACAAGCATCTTTATATAACATGAATGGAGTACCGGT 72976 Query 71850 TTCAATCTGAG-ATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAT-TCTTG 71907 |||| | |||| | || | | | || | ||| | | | ||||| || | | ||| Sbjct 72975 TTCAGTTTGAGCACTCAAGA-TGGCATACCACAACTTTTGGGCCTTGATAGTTTGTCTAC 72917 Query 71908 TATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTG 71967 | | |||||| ||||||||| |||||||| |||||| || || || | ||| Sbjct 72916 CA-CGGTTTTCTTTTTCGTATTTGGTATATAACTCTTCGAATTCATCACCATAGACATCA 72858 Query 71968 TCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGT 72027 || || ||| ||| || ||| | | || | ||| || | | | | |||| Sbjct 72857 GACAAACCTGGAGCTTCGTTTGGAGAGAATAAGGTCCAGTCGGCGTTTTGTTCAACTCTC 72798 Query 72028 TTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCG 72087 |||||||| | ||| || ||||| | ||| || | |||||| | ||| || || Sbjct 72797 TTCATAAACAAATCTGGGATCCATAAGGCTGGGAACAAATCTCTAGCTCTGATTTCTTCT 72738 Query 72088 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 72147 || || |||||| ||| ||| | ||| | | |||||| ||||| ||||||||| Sbjct 72737 TTACCGTGGTTCTTTCTAATATCAATGAAATCAAATATATCACTGTGCCATGGTTCCAAG 72678 Query 72148 TATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 72207 || | ||| | | | || || | |||||| || || || || | ||| | || ||||| Sbjct 72677 TACAAGGCAAAAGCACCTGGTCTTTTGTTACCACCTTGGTCAACGTAACGGGCAGTGTTG 72618 Query 72208 TTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAG 72267 ||| ||||||| | ||| ||||| ||||||||||||| |||||| || || | || || Sbjct 72617 TTAAAAACTCTGACCATAGGAATGATACCATTGGATGTACCATTAGTACCAGCAATGTAT 72558 Query 72268 CTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 72327 ||| | | |||||| ||| ||| | ||| || || || || | || || ||| Sbjct 72557 GCACCAGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCACTCTTGGAAATT 72498 Query 72328 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 72387 || || ||| ||| || ||||| || || || || ||| ||| ||| |||| ||| Sbjct 72497 AAAGCACATGATTTCAAAGTATCGTAAATACCTTCAATAGAATCGTCCTTCATAGCAAGC 72438 Query 72388 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 72447 | ||||| |||||||| | | || || || || || || ||||||| | Sbjct 72437 AAGAAACATGAGGACATTTGTGGTCTTGGGGTACCTGCGTTGAACAAACAAGGAGAACCA 72378 Query 72448 TGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCAT 72507 || || || || ||| ||||| | || || || ||||| || | ||||| | Sbjct 72377 TGTGTGAAGTATCTTTGAGACATCAAGTTATATGTTTCAATGACTCTTGGAATATCTCTA 72318 Query 72508 TGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTA 72567 || || || | || || | ||| | | ||| || ||||||||| | | ||| | Sbjct 72317 CCGTGAATACCAATAGCAACTCTCATAATTAAATGTTGTGGTCTTTCAGCAACCTTACCA 72258 Query 72568 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAA 72625 || || |||||||| ||| |||||| ||||| |||||||| ||||| || ||||| Sbjct 72257 TTAATACGTAACAAGTAAGATCTTTCCATGGTTTTGAAACCAAAGTAGTTATAATTGAAA 72198 Query 72626 AGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCA 72685 |||| ||||| | |||| | || || | || || | || || || | |||| || Sbjct 72197 --TCTCTATCGTAGACAATAGCAGAGTTTAATTCGTCTTCATTTTCCTTGATGATAT-CA 72141 Query 72686 TGGTGATAC--TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAA 72743 | || | | ||||||| || ||||||||| ||| |||| || || | ||| | | | Sbjct 72140 T-ATGTTTCCTTTGAAATCATAGGAGAATGTAAACCAGTTTTTGGGTTGATATATTCGTA 72082 Query 72744 TAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGC 72803 |||| | || |||| | || |||| | |||| || |||| ||| || ||||| Sbjct 72081 TAAAGCTTCGGAAACTTTGGAATATTGTTTGGTGGTTTGTTTATGTAAATTGGAGACGGC 72022 Query 72804 TATTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTC 72863 ||||| || || | || || ||||||||||| ||||| || || || ||||| Sbjct 72021 AATTCTAGCTGCCAAAACAGCGTAATCTGGATGAACGGTAGTCATGGTAGCAGCAATTTC 71962 Query 72864 TGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCC 72899 || |||| | || ||||| || || || || || Sbjct 71961 AGCAGCCAAGTTATCTAATTCAACAGTGGTAACACC 71926 Score = 405 bits (448), Expect = 7e-108 Identities = 632/900 (70%), Gaps = 14/900 (2%) Strand=Plus/Minus Query 41754 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCT 41813 ||| ||||||||| || |||||| || ||| || | ||||||||||| ||||| | Sbjct 114902 CTTTAGACATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCGAAAAAGTTAGTTT 114843 Query 41814 TTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttt 41873 | || |||| || |||||||||||||||||||| ||||||||||||||||||| ||| | Sbjct 114842 TACCGGCCAAGGAGATATTTTCCATGAAATCAAATGGATTGGTAACATTATAAACTTTCT 114783 Query 41874 tAAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTT 41933 || ||||| || | | |||||||| || | |||| | |||| ||| | | Sbjct 114782 TATTACCCAAAGCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATTAAAT 114723 Query 41934 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAG 41993 | ||||||| |||| | |||||||||||| |||||| | |||||| |||||| Sbjct 114722 TAGAATTCATACCTAATAAAGAAACTGGAAGAGCATCAGTAAAATATTCTTTTTCAATTT 114663 Query 41994 AGACCGCGTCTGTTATAATAGATCTT----ACTGTTTCTTCACTCGGTGGATACAATAAA 42049 || || || | ||| ||| || || ||||| | ||| || |||| Sbjct 114662 CAACAGCTTCA---ACAAT-GATTTTTTCAACAATTTCTGGAGATGGTCTATTTTGTAAA 114607 Query 42050 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCG 42109 || || | ||||| || ||||| || | ||| |||||||||| ||||||||| Sbjct 114606 TGGGAGAATAATAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTCA 114547 Query 42110 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAAT 42169 ||||| || || | || ||||| | || | |||||| | |||||| ||||| |||||| Sbjct 114546 TTGGAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTTAACCAAAAGATAGAAGCAAAT 114487 Query 42170 GATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCG 42229 || ||| |||||| || ||||| | || ||||| |||| | ||| || |||| Sbjct 114486 GAACCACTAAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAA 114427 Query 42230 GCAC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATC 42286 ||| | || || ||||| || |||||||| || || || | | ||| || || Sbjct 114426 GCATCTTTATCTTGGATCCATTTAATGGCCCAATCAGCTTTTTTGGTAATACATGGAATA 114367 Query 42287 GTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATC 42346 |||| ||||||||||| | | | ||| | |||||||||||| || || ||| Sbjct 114366 TTTTCAATGGCATTAAATAAGAAATCAGCTTCTTGTGGATCTTTAACATAAGTTTCAATC 114307 Query 42347 AAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACAT 42406 || | | ||||||||| |||||||||||||| || || ||||| || || || || Sbjct 114306 AATAAAGAATACATTTCAGAATGAATGTTTTCCATCATAATTTGAAAACCATAAAATGAT 114247 Query 42407 CTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATT 42466 | || || | | || ||||| | | |||| |||| |||||||||| || ||||| Sbjct 114246 TTAGCTTCTGGCAGTTGAACTTCAGCAGAAAAATTTTCAACTAAATTTTCATTAACTATA 114187 Query 42467 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTT 42526 || || || |||||||| ||||| || ||||| ||| |||| | ||| Sbjct 114186 CCATCTGATGCAGCAAAAAAGGCCAAAACTCTAGAAATAAAGTATCTTTCATTATCAGTT 114127 Query 42527 AATTTA---TTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAAT 42583 |||||| |||||||||| | ||||||| || ||| |||||||| | |||||||| Sbjct 114126 AATTTATTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCAGCTGTCCAAAAG 114067 Query 42584 GATGCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACA 42643 || ||||| || |||||||| | |||||| || ||||| |||| |||||| || |||||| Sbjct 114066 GAAGCTTCAGCTTTTTTATAAAAATTCCAAATTTCATGGTATTTAATTGGAAACATAACA 114007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671134913098360