Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq510 118 2e-21 >seq510 Length=157725 Score = 118 bits (130), Expect = 2e-21 Identities = 379/581 (65%), Gaps = 8/581 (1%) Strand=Plus/Plus Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055 ||||||| || | || ||||| |||||| | | || ||||| ||| | || ||||||| Sbjct 114012 TGTTTCCAATTAAATACCATGAAATTTGGAATTTTTATAAAAAAGCTGAAGCTTCCTTTT 114071 Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115 |||| | ||||| || ||| | || || || | |||||| | | | || |||| Sbjct 114072 GGACAGCTGAAGAAGTTGATTTAAGTAAAGATTTGGATGATTGGAACAATAAATTAACTG 114131 Query 125116 AAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCG 125175 | | ||| || | ||||| || |||||||||| ||||| | || ||||| || | Sbjct 114132 ATAATGAAAGATACTTTATTTCTAGAGTTTTGGCCTTTTTTGCTGCATCAGATGGTATAG 114191 Query 125176 TCAACGACAATCT-GTTGACACGATTCTCT-CAAGAGTTGACCATTCCAGAGGTGTCGTG 125233 | || || ||| | ||||| | || ||| | |||| | | | ||||| | | Sbjct 114192 TTAATGAAAATTTAGTTGA-AAATTTTTCTGCTGAAGTTCAAC-TGCCAGAAGCTAAATC 114249 Query 125234 CTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGAT 125293 ||||| || || ||||| ||||| || ||| | || || |||||||| ||| | |||| Sbjct 114250 ATTTTATGGTTTTCAAATTATGATGGAAAACATTCATTCTGAAATGTATTCTTTATTGAT 114309 Query 125294 TGACATGTACATTCGCGATCCGCAACGTAAAC--ACATGCTCTTTAACGCAATCGACACG 125351 ||| | || || ||||| ||| || | | | | ||||| || || || | Sbjct 114310 TGAAACTTATGTTAAAGATCCACAA--GAAGCTGATTTCTTATTTAATGCCATTGAAAAT 114367 Query 125352 GTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCT 125411 | || | ||| ||||| ||| | |||| ||| |||||| | || | | || Sbjct 114368 ATTCCATGTATTACCAAAAAAGCTGATTGGGCCATTAAATGGATCCAAGATAAAGATGCT 114427 Query 125412 TCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGT 125471 | || || || ||| |||| || || || || | || || || |||||| ||| Sbjct 114428 TTATATGCTGAAAGATTGGTTGCTTTTGCTGCTATTGAAGGTATTTTCTTTAGTGGTTCA 114487 Query 125472 TTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAAC 125531 ||||| | ||||||||| | || ||| | || | ||||| || |||| | || Sbjct 114488 TTTGCTTCTATCTTTTGGTTAAAAAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCCAAT 114547 Query 125532 GAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572 || || || | | |||| || || |||| ||| ||||| Sbjct 114548 GAATTAATTTGTAGAGATGAAGGTTTACATACTGATTTTGC 114588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741054466484360