Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq93 107 1e-18 seq100 96.9 2e-15 >seq93 Length=17569 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 43893 AACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGT 43952 |||| ||||||||||| || ||||| |||| || || ||||| || || ||||| Sbjct 17113 AACCACCTCTCAATCTCAAGACCAAGTGTAAGGTTGATTCCTTTTGGATGTTGTAATCAG 17172 Query 43953 TTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAG 44012 ||| | | || || |||||||| || || || ||||| | ||| || || | | Sbjct 17173 ATAAAGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCAGGTG 17232 Query 44013 GTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCA 44072 | | ||||||||||||| ||||| |||||| | | | ||| || | | || | Sbjct 17233 GAATACCTTCTTTATCTTGGATTTTGGATTTGACATTGTCGATAGTGTCAGAAGATTCAA 17292 Query 44073 CATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 | || | ||||||||||||||||| ||||| || || || |||||||| Sbjct 17293 CTTCTAAAGTAATTGTTTTACCGGTCAAAGTTTTGACGAAAATTTGCAT 17341 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||||||||| || ||||| |||| || || ||||| || || ||||| Sbjct 17342 ACCACCTCTCAATCTCAAAACCAAGTGTAAGGTTGATTCCTTTTGGATGTTGTAATCAGA 17401 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 ||| | | || || |||||||| || || || ||||| | ||| || || | || Sbjct 17402 TAAAGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGG 17461 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||||||||||||| ||||| |||||| | | | ||| || | | || || Sbjct 17462 AATACCTTCTTTATCTTGGATTTTGGATTTGACATTGTCGATAGTGTCAGAAGATTCAAC 17521 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||||||||||||||| ||||| || || || |||||||| Sbjct 17522 TTCTAAAGTAATTGTTTTACCGGTCAAAGTTTTGACGAAAATTTGCAT 17569 >seq100 Length=74788 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||||||||| || ||||| || | || || ||||| || || || ||| Sbjct 22414 ACCACCTCTCAATCTCAAGACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCGGA 22473 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || | | || ||||||||||| || ||||| ||||| | ||| || || | || Sbjct 22474 CAAAGTTCTACCGTCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGG 22533 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||||||||||||| ||| || |||||| | | | || || | | || || Sbjct 22534 AATACCTTCTTTATCTTGAATCTTAGATTTGACATTGTCGATGGTGTCGGAGGATTCGAC 22593 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| |||||||| ||||| ||||| || || |||||||| Sbjct 22594 TTCCAAGGTAATAGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 22641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354775390511628