Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq510 356 2e-93 >seq510 Length=157725 Score = 356 bits (394), Expect = 2e-93 Identities = 625/901 (69%), Gaps = 13/901 (1%) Strand=Plus/Minus Query 12842 TTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTT 12901 || ||||||||| ||||||||| || |||||| ||||| |||||||| ||||| Sbjct 114900 TTAGACATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCGAAAAAGTTAGTTTTA 114841 Query 12902 CCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAATAGTA--TTTTT 12959 || | || || ||||||||||| ||||| || ||||| | |||| || | ||| | Sbjct 114840 CCGGCCAAGGAGATATTTTCCATGAAATCAAATGGATTGGT--AACATTATAAACTTTCT 114783 Query 12960 TACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAAT 13019 || || || | | ||| ||||| ||||||||| | || | || || |||||||| Sbjct 114782 TATTACCCAAAGCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATTAAAT 114723 Query 13020 CACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATAT 13079 | | ||||| |||| ||| || || | ||| || || ||| | | |||||| || | Sbjct 114722 TAGAATTCATACCTAATAAAGAAACTGGAAGAGCATCAGTAAAATATTCTTTTTCAATTT 114663 Query 13080 CAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTA-ATGGAGGATTTGATAGATGC 13138 |||| ||||| | || || | | | | | |||| | |||| |||| || ||| Sbjct 114662 CAACAGCTTCAACAATGATTTTT-TCAACAATTTCTGGAGATGGTCTATTTTGTAAATGG 114604 Query 13139 TTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTT 13198 || | | ||| ||||||||| || || ||||||||||||| |||| || || Sbjct 114603 GAGAATAATAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTCATTG 114544 Query 13199 GAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAA 13258 || || || | ||| ||||| | |||| ||||| | |||||| |||| |||||| ||| Sbjct 114543 GAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTTAACCAAAAGATAGAAGCAAATGAA 114484 Query 13259 CCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTA 13318 || ||| || || ||||||| || ||||| || | ||| |||||| |||| | | Sbjct 114483 CCACTAAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGCA 114424 Query 13319 TTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTT 13378 | |||| | ||||| || ||||||| | ||||||| ||| || |||||| Sbjct 114423 TCTTTATCTTGGATCCATTTAATGGCCCAATCAGCTTTTTTGGTAATACATGGAATATTT 114364 Query 13379 TCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAAT 13438 || || || |||||||| ||| ||| | ||| || |||||| || |||||| Sbjct 114363 TCAATGGCATTAAATAAGAAATCAGCTTCTTGTGGATCTTTAACATAAGTTTCAATCAAT 114304 Query 13439 AAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTA 13498 || ||||||||| |||||||| ||||||||| ||||| ||||||||||| || || Sbjct 114303 AAAGAATACATTTCAGAATGAATGTTTTCCATCATAATTTGAAAACCATAAAATGATTTA 114244 Query 13499 GCCTCTGATACCTGAACTTC-GGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCC 13557 || |||| | |||||||| | || ||||| |||| |||| ||||| |||||||| || Sbjct 114243 GCTTCTGGCAGTTGAACTTCAGCAGAAAAAT-TTTCAACTAAATTTTCATTAACTATACC 114185 Query 13558 GTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAA 13617 || ||||||||||| || | | |||||| | | |||| || || | || Sbjct 114184 ATCTGATGCAGCAAAAAAGGCCAAAACTCTAGAAATAAAGTATCTTTCATTATCAGTTAA 114125 Query 13618 CTTTA----ACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAG 13673 |||| |||||| |||||||| |||||| || || ||| | |||||||| | Sbjct 114124 -TTTATTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCAGCTGTCCAAAAGG 114066 Query 13674 AAGCAACAGCCTTCTTATACATCATCCATATATCCTTATAAACAATGGGAAACACAACGT 13733 |||| |||| || ||||| | |||| || || | || ||| ||||||| ||| | Sbjct 114065 AAGCTTCAGCTTTTTTATAAAAATTCCAAATTTCATGGTATTTAATTGGAAACATAACAT 114006 Query 13734 A 13734 | Sbjct 114005 A 114005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430979715922422