Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq510 244 2e-59 seq100 156 1e-32 seq93 150 4e-31 >seq510 Length=157725 Score = 244 bits (270), Expect = 2e-59 Identities = 600/902 (67%), Gaps = 21/902 (2%) Strand=Plus/Plus Query 268705 TGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACAGGCCGTTGCTTC 268764 ||| || |||||||| | | ||| || |||| | || ||| | || | ||||| Sbjct 114007 TGTTATGTTTCCAATTAAATACCATGAAATTTGGAATTTTTATAAAAAAGCTGAAGCTTC 114066 Query 268765 TTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAAAAATTTAAA 268824 |||||||| | |||||||| ||| | | | || || |||||||| ||| | Sbjct 114067 CTTTTGGACAGCTGAAGAAGTTGATTTAAGTAAAGATTTGGATGATTGGAACAATAAATT 114126 Query 268825 ACCAGAA---GAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGATGG 268881 | | || |||||| ||||| ||| || | || |||||||| | ||||| Sbjct 114127 AACTGATAATGAAAGATACTTTATTTCTAGAGTTTTGGCCTTTTTTGCTGCATCAGATGG 114186 Query 268882 TATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAG 268941 ||| ||||| |||||| |||| || || || | | || || || | || ||||| | Sbjct 114187 TATAGTTAATGAAAATTTAGTTGAAAATTTTTCTGCTGAAGTTCAACTGCCAGAAGCTAA 114246 Query 268942 ATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATT 269001 || ||||| || || || || || ||||| |||||||| || ||||| | |||| Sbjct 114247 ATCATTTTATGGTTTTCAAATTATGATGGAAAACATTCATTCTGAAATGTATTCTTTATT 114306 Query 269002 AATAGATACTTATATAGATGATA-ACAACGAAAAGAAAAGACTATTTTCTTCTATGAGAA 269060 || || |||||| | | ||| |||| ||| | ||||| | | || || Sbjct 114307 GATTGAAACTTATGTTAAAGATCCACAA-GAAGCTGATTTCTTATTTAATGCCATTGAAA 114365 Query 269061 CTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGATAGCGCGC 269120 ||| ||| | | |||||| |||| ||||| | |||||||| | |||| | Sbjct 114366 ATATTCCATGTATTACCAAAAAAGCTGATTGGGCCATTAAATGGATCCAAGATAAAGATG 114425 Query 269121 CTT---ACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGT 269177 ||| | | ||||| || ||||||||||| ||| | |||||||| |||||| || | Sbjct 114426 CTTTATATGCTGAAAGATTGGTTGCTTTTGCTGCTATTGAAGGTATTTTCTTTAGTGGTT 114485 Query 269178 CTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTA 269237 | ||||| ||||||||||||| || || ||||| | |||||||| || |||||||| | Sbjct 114486 CATTTGCTTCTATCTTTTGGTTAAAAAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCCA 114545 Query 269238 ACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTATTTACTA 269297 | ||||| || | || || ||||||||||| || || |||||||||||||| | Sbjct 114546 ATGAATTAATTTGTAGAGATGAAGGTTTACATACTGATTTTGCTTGTTTATTATTCTCCC 114605 Query 269298 ATTATCTTTCACACAAACCTTCTCAAGATAGAGTATACGAAATTATAGATTCAGCTGTTT 269357 ||| | | | | ||| |||| ||| | || | |||| || | | ||||||| Sbjct 114606 ATT---TACAAAATAGACCATCTCCAGAAATTGTTGAAAAAATCATTGTTGAAGCTGTTG 114662 Query 269358 CTGTAGAAACAGAATTTCTAACGGAAGCTCTATC--TATCGATCTTATCGGTATGAATAG 269415 | |||| ||||| | | || || ||||| | | || | ||| ||||||||| Sbjct 114663 AAATTGAAAAAGAATATTTTACTGATGCTCTTCCAGTTTCTTTATTA--GGTATGAATTC 114720 Query 269416 CAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGATTGCTGGTGTCTTTAGGGTT 269475 || | ||| ||||| || | | || |||||||||| | | |||| || Sbjct 114721 TAATTTAATGTGTCAATATGTTGAATATGTTGCTGATAGATTATTATTTGCTTTGGG--- 114777 Query 269476 TAGTAAAAAA---TATAACGTTGAAAATCCGTTTAGTTTTATGGAGAATATATCATTAGA 269532 || ||| ||| ||||| ||| ||||| ||| ||| ||||| ||||| || || | Sbjct 114778 TAATAAGAAAGTTTATAATGTTACCAATCCATTTGATTTCATGGAAAATATCTCCTTGGC 114837 Query 269533 AGGTAAGGCTAATTTCTTCGAGAAGCGGGTAAGTAACTATCAGAAAATGGGTGTAATGTC 269592 ||||| |||| || ||||| ||| | || | | ||||| ||| ||||| ||||| Sbjct 114838 CGGTAAAACTAACTTTTTCGAAAAGAGAGTTTCTGATTATCAAAAAGCTGGTGTTATGTC 114897 Query 269593 TA 269594 || Sbjct 114898 TA 114899 >seq100 Length=74788 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || || |||||||| || || || || ||||| || | ||||||||||||||| | |||| Sbjct 22439 TGCAAGGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCGTCTTCCAATTGT 22498 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || |||||||| || | || ||||||||||| || || ||||||||||| |||||||| Sbjct 22499 TTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTATCTTGAATCTTA 22558 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | ||| ||||| || | ||| ||| | ||| || || | |||||||| |||||||| Sbjct 22559 GATTTGACATTGTCGATGGTGTCGGAGGATTCGACTTCCAAGGTAATAGTTTTACCAGTT 22618 Query 104537 AGTGTTTTTACAAATATCTGCAtttt 104562 | || || || || || ||||| || Sbjct 22619 AAGGTCTTGACGAAAATTTGCATCTT 22644 >seq93 Length=17569 Score = 150 bits (166), Expect = 4e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 ||||| || ||||| || || || || || ||||||| ||||||||||||||||| |||| Sbjct 17139 TGTAAGGTTGATTCCTTTTGGATGTTGTAATCAGATAAAGTTCTACCGTCTTCTAATTGT 17198 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || ||||| ||||| | || ||||||||||| || || ||||||||||| || || || Sbjct 17199 TTACCAGCGAAAATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTATCTTGGATTTTG 17258 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | ||| ||||| || | || || || ||| || |||| ||||| || ||||| || Sbjct 17259 GATTTGACATTGTCGATAGTGTCAGAAGATTCAACTTCTAAAGTAATTGTTTTACCGGTC 17318 Query 104537 AGTGTTTTTACAAATATCTGCAt 104559 | ||||| || || || ||||| Sbjct 17319 AAAGTTTTGACGAAAATTTGCAT 17341 Score = 150 bits (166), Expect = 4e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 ||||| || ||||| || || || || || ||||||| ||||||||||||||||| |||| Sbjct 17367 TGTAAGGTTGATTCCTTTTGGATGTTGTAATCAGATAAAGTTCTACCGTCTTCTAATTGT 17426 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || ||||| ||||| | || ||||||||||| || || ||||||||||| || || || Sbjct 17427 TTACCAGCGAAAATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTATCTTGGATTTTG 17486 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | ||| ||||| || | || || || ||| || |||| ||||| || ||||| || Sbjct 17487 GATTTGACATTGTCGATAGTGTCAGAAGATTCAACTTCTAAAGTAATTGTTTTACCGGTC 17546 Query 104537 AGTGTTTTTACAAATATCTGCAt 104559 | ||||| || || || ||||| Sbjct 17547 AAAGTTTTGACGAAAATTTGCAT 17569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151390861578788