Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq100 140 3e-28 seq93 120 3e-22 >seq100 Length=74788 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| ||| ||||||||||| |||||||||||||| | ||| || ||| | Sbjct 22415 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCGGAC 22474 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | || |||| ||||| || ||||||| |||||||| ||||| || ||| Sbjct 22475 AAAGTTCTACCGTCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGA 22534 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||||||||| || | ||| || | ||||| | ||| ||||| | | ||||| Sbjct 22535 ATACCTTCTTTATCTTGAATCTTAGATTTGACATTGTCGATGGTGTCGGAGGATTCGACT 22594 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || || ||||| ||||| | || || || || || ||||| Sbjct 22595 TCCAAGGTAATAGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 22641 >seq93 Length=17569 Score = 120 bits (132), Expect = 3e-22 Identities = 170/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || || |||||||||| ||| |||||||| || || ||||||||||| | | Sbjct 17331 AAAATTTGCATACCACCTCTCAATCTCAAAACCAAGTGTAAGGTTGATTCCTTTTGGATG 17390 Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 || ||||| | ||| | || || | ||||| || | || || |||||||| Sbjct 17391 TTGTAATCAGATAAAGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGT 17450 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 ||||| || |||||||||||||| || | ||||| | ||||| | ||| ||||||| Sbjct 17451 TGATCAGGTGGAATACCTTCTTTATCTTGGATTTTGGATTTGACATTGTCGATAGTGTCA 17510 Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || | || || ||||| || || | |||||| || || || ||||| Sbjct 17511 GAAGATTCAACTTCTAAAGTAATTGTTTTACCGGTCAAAGTTTTGACGAAAATTTGCAT 17569 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| ||| |||||||| || || ||||||||||| | ||| ||||| Sbjct 17115 CCACCTCTCAATCTCAAGACCAAGTGTAAGGTTGATTCCTTTTGGATGTTGTAATCAGAT 17174 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | || || | ||||| || | || || |||||||| ||||| || ||| Sbjct 17175 AAAGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGGA 17234 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||||||||| || | ||||| | ||||| | ||| |||||||| || || Sbjct 17235 ATACCTTCTTTATCTTGGATTTTGGATTTGACATTGTCGATAGTGTCAGAAGATTCAACT 17294 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || || ||||| || || | |||||| || || || ||||| Sbjct 17295 TCTAAAGTAATTGTTTTACCGGTCAAAGTTTTGACGAAAATTTGCAT 17341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448288336539960