Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq510 410 1e-109 >seq510 Length=157725 Score = 410 bits (454), Expect = 1e-109 Identities = 633/906 (70%), Gaps = 5/906 (1%) Strand=Plus/Minus Query 21156 TATCTTCtttttttGACATAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAA 21215 ||||||| ||| ||||||| || ||||||||||||| |||||| |||||||||| Sbjct 114911 TATCTTCAGCTTTAGACATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCGAAAA 114852 Query 21216 AATTTGTCTTTCCTTCCAATGATATAGATTCCATAAAATCAAATGGATTTTCAGATTTAA 21275 | || || || || |||| || ||| |||||| |||||||||||||| | ||| Sbjct 114851 AGTTAGTTTTACCGGCCAAGGAGATATTTTCCATGAAATCAAATGGATTGGTAACATTAT 114792 Query 21276 ATATTTTATTACAACCCAGTTCTGATAATAATCTATCTGCTACAAATTCTATATATTGAC 21335 | | ||| ||| ||||| | ||||||||||||| || ||| |||| | |||||||| Sbjct 114791 AAACTTTCTTATTACCCAAAGCAAATAATAATCTATCAGCAACATATTCAACATATTGAC 114732 Query 21336 ACATTAATTCACAATTCATACCGATCAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATT 21395 ||||||| | | |||||||||| | || || |||||||| | || ||| | || Sbjct 114731 ACATTAAATTAGAATTCATACCTAATAAAGAAACTGGAAGAGCATCAGTAAAATATTCTT 114672 Query 21396 TTTCTATAGAGACGGCTTCAACAATTATATTTATTATCCTAGATGTACTAGGGGGATACA 21455 |||| || || ||||||||||| || ||| | | || | || || Sbjct 114671 TTTCAATTTCAACAGCTTCAACAATGATTTTTTCAACAATTTCTGGAGATGGTCTATTTT 114612 Query 21456 ATAATTGTTTAAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTA 21515 ||| || || | ||||| ||||||||| ||| ||||||||||| |||| |||| Sbjct 114611 GTAAATGGGAGAATAATAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAAATTA 114552 Query 21516 ATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACG 21575 ||||||| || || || ||||| ||||| || |||||||||||||||||||| || || | Sbjct 114551 ATTCATTGGAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTTAACCAAAAGATAGAAG 114492 Query 21576 CAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGT 21635 |||||| || ||||||||| || |||| |||||||| ||||| |||| |||| | | Sbjct 114491 CAAATGAACCACTAAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCAT 114432 Query 21636 ATGTAGATTCTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAAT 21695 || || |||||||| |||||||| ||||| | || |||| ||||||| Sbjct 114431 ATAAAGCATCTTTATCTTGGATCCATTTAATGGCCCAATCAGCTTTTTTGGTAATACATG 114372 Query 21696 CAATTGTATCAATAGCTTTTAA-AAGATGAtttttttCATCTACATCGGTTATGNNNNNN 21754 ||| | ||||| || || || |||| || ||| | | ||| | | Sbjct 114371 GAATATTTTCAATGGCATTAAATAAGA-AATCAGCTTCTTGTGGATCTTTAACATAAGTT 114313 Query 21755 NNNNNNNNNNNACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAA 21814 | ||||||||||||||| || ||||| ||| || ||||| || ||| Sbjct 114312 TCAATCAATAAAGAATACATTTCAGAATGAATGTTTTCCATCATAATTTGAAAACCATAA 114253 Query 21815 AAACATCTTGCCTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTT 21874 || || | || |||| |||||| || | | |||| || | | || |||||||| Sbjct 114252 AATGATTTAGCTTCTGGCAGTTGAACTTCAGCAGAAAAATTTTCAACTAAATTTTCATTA 114193 Query 21875 ACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTA 21934 ||||| ||||| || |||||||| ||||| | | ||||| |||| ||| ||| Sbjct 114192 ACTATACCATCTGATGCAGCAAAAAAGGCCAAAACTCTAGAAATAAAGTATCTTTCATTA 114133 Query 21935 TCTGTTAAT---TTTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTC 21991 || |||||| || |||||||| |||||||| |||||| |||||||||| |||| Sbjct 114132 TCAGTTAATTTATTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCAGCTGTC 114073 Query 21992 CAAAAGCTAGCAATAGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAAT 22051 |||||| ||| ||| |||||||| | | |||| || |||| ||| | |||||||| Sbjct 114072 CAAAAGGAAGCTTCAGCTTTTTTATAAAAATTCCAAATTTCATGGTATTTAATTGGAAAC 114013 Query 22052 ATTACA 22057 || ||| Sbjct 114012 ATAACA 114007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531897402483640