Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq100 129 5e-25 seq93 116 3e-21 >seq100 Length=74788 Score = 129 bits (142), Expect = 5e-25 Identities = 171/235 (73%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 115279 ATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA 115338 |||||| ||||||||||| ||||| || | || || ||||| |||||| | ||| || Sbjct 22648 ATTAAAGATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACTATTACCTTGGAAGTCGA 22589 Query 115339 GTCCAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCG 115397 ||| |||||| | | |||| || ||| || ||| ||||||||||| | || Sbjct 22588 ATCCTCCGACACCATCG-ACAATGTCAAATCTAAGATTCAAGATAAAGAAGGTATTCCAC 22530 Query 115398 TTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCG 115457 |||||| |||||| | || | ||| || |||||||| ||||| | | ||| || ||| Sbjct 22529 CTGATCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGACGGTAGAACTTTGTCCG 22470 Query 115458 ATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 | || ||||| ||||| || ||||| | || |||| ||||||||| |||| || Sbjct 22469 ACTACAACATCCAAAAGGAATCTACCTTGCACTTGGTCTTGAGATTGAGAGGTGG 22415 >seq93 Length=17569 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| |||||||| | || || ||||| ||||| | ||| || || Sbjct 17341 ATGCAAATTTTCGTCAAAACTTTGACCGGTAAAACAATTACTTTAGAAGTTGAATCTTCT 17282 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| | | |||| || ||| ||||| ||||||||||| | || |||||| Sbjct 17281 GACACTATCG-ACAATGTCAAATCCAAAATCCAAGATAAAGAAGGTATTCCACCTGATCA 17223 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| | |||| || || |||||||||||||| | | ||| | | ||||| || Sbjct 17222 ACAAAGATTGATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACTTTATCTGATTACAA 17163 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| ||||| || || || |||| |||| ||||||||| |||| || Sbjct 17162 CATCCAAAAGGAATCAACCTTACACTTGGTCTTGAGATTGAGAGGTGG 17115 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| |||||||| | || || ||||| ||||| | ||| || || Sbjct 17569 ATGCAAATTTTCGTCAAAACTTTGACCGGTAAAACAATTACTTTAGAAGTTGAATCTTCT 17510 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| | | |||| || ||| ||||| ||||||||||| | || |||||| Sbjct 17509 GACACTATCG-ACAATGTCAAATCCAAAATCCAAGATAAAGAAGGTATTCCACCTGATCA 17451 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| | |||| || || |||||||||||||| | | ||| | | ||||| || Sbjct 17450 ACAAAGATTGATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACTTTATCTGATTACAA 17391 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| ||||| || || || |||| |||| ||||||||| |||| || Sbjct 17390 CATCCAAAAGGAATCAACCTTACACTTGGTTTTGAGATTGAGAGGTGG 17343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425341351037320