Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq510 324 2e-83 >seq510 Length=157725 Score = 324 bits (358), Expect = 2e-83 Identities = 641/943 (68%), Gaps = 47/943 (5%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 |||||||||| |||||| || || |||| | ||||| || || || || || || | Sbjct 114895 CATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCGAAAAAGTTAGTTTTACCGGC 114836 Query 92850 CAA--AGATATC------GAATTCACTAGTGATTGGATTCTTGGCGTTATAA---TACTT 92898 ||| |||||| ||| ||| | |||||| | | |||||| | ||| Sbjct 114835 CAAGGAGATATTTTCCATGAAATCA------AATGGATTGGTAACATTATAAACTTTCTT 114782 Query 92899 TTCACCGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAA 92958 | ||| ||| | | |||||||||||||| ||| |||| | || ||| |||| || Sbjct 114781 ATTACC---CAAAGCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATTAA 114725 Query 92959 ATCACAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGAT 93018 || | ||||||| |||| | | || || ||||| || || || | ||||| || || Sbjct 114724 ATTAGAATTCATACCTAATAAAGAAACTGGAAGAGCATCAGTAAAATATTCTTTTTCAAT 114665 Query 93019 TACAACGGCTTCTTTCAAGATTTCTATTACTCTACTATTT-----GGTGGT---TTTTGT 93070 | |||| ||||| | ||||| | || || |||| | |||| |||||| Sbjct 114664 TTCAACAGCTTCAACAATGATTTTT-----TCAACAATTTCTGGAGATGGTCTATTTTGT 114610 Query 93071 ACGACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATC 93130 | || | | | ||| || ||||| || |||||||||||||| |||| | || Sbjct 114609 AA---ATGGGAGAATAATAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAAATT 114553 Query 93131 AACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAA 93190 || |||||| ||| || |||||||| | || |||| || || | |||||| || ||| Sbjct 114552 AATTCATTGGAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTTAACCAAAAGATAGAA 114493 Query 93191 GCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCA 93250 ||||| |||| ||| || |||||||| | || ||||| || || | | ||| ||| Sbjct 114492 GCAAATGAACCACTAAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCA 114433 Query 93251 AAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAA 93310 | || ||| ||||||||| | |||||||| |||||||| ||||||| Sbjct 114432 TATAAAGCATCTTTATCTTGGATCCATTTAATGGCCCAATCAGCTTTTTTGGTAATACAT 114373 Query 93311 GGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTA 93370 || | |||| || || ||||||| | |||| || | | |||| | || || Sbjct 114372 GGAATATTTTCAATGGCATTAAATAAGAAATCAGCTTCTTGTGGATCTTTAACATAAGTT 114313 Query 93371 TCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAG 93430 || || || | |||||||||||||||||| | || ||||| |||||| || || || Sbjct 114312 TCAATCAATAAAGAATACATTTCAGAATGAATGTTTTCCATCATAATTTGAAAACCATAA 114253 Query 93431 AAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTG 93490 || || ||||||| | | || ||||| |||||| | || || | ||||||||| Sbjct 114252 AATGATTTAGCTTCTGGCAGTTGAACTTCAGCAGAAAAATTTTCAACTAAATTTTCATTA 114193 Query 93491 ACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTT----ATAAAATGTTTCTC 93546 ||||||||||| ||||| |||||||| ||||| | || | ||||| | | | || Sbjct 114192 ACTATACCATCTGATGCAGCAAAAAAGGCCAAAA----CTCTAGAAATAAAGTATCTTTC 114137 Query 93547 ATCATC-TTTAA--GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGAC 93603 || ||| |||| || | |||||| | |||||| | ||| |||||||| | Sbjct 114136 ATTATCAGTTAATTTATTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCAGC 114077 Query 93604 AGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGG 93663 |||||||| || ||||| |||||||| || | || ||| || || || |||| |||||| Sbjct 114076 TGTCCAAAAGGAAGCTTCAGCTTTTTTATAAAAATTCCAAATTTCATGGTATTTAATTGG 114017 Query 93664 AAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTCT 93706 ||| || ||| ||||| ||| ||||||| ||| || ||| Sbjct 114016 AAACATAACATAACGACGTTTGTTTTCTTTTAATAATGGTTCT 113974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556857243051640