Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq93 122 2e-22 seq100 107 5e-18 >seq93 Length=17569 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || || || | | || | ||||||||||||||||| || ||||| Sbjct 17150 TTCCTTTTGGATGTTGTAATCAGATAAAGTTCTACCGTCTTCTAATTGTTTACCAGCGAA 17209 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||| | |||||| | ||| || ||||||||||| |||||||| | ||| || || Sbjct 17210 AATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTATCTTGGATTTTGGATTTGACATT 17269 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || ||||| ||||| | || || || || ||||||| ||| ||||| Sbjct 17270 GTCGATAGTGTCAGAAGATTCAACTTCTAAAGTAATTGTTTTACCGGTCAAAGTTTTGAC 17329 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 17330 GAAAATTTGCAT 17341 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || || || | | || | ||||||||||||||||| || ||||| Sbjct 17378 TTCCTTTTGGATGTTGTAATCAGATAAAGTTCTACCGTCTTCTAATTGTTTACCAGCGAA 17437 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||| | |||||| | ||| || ||||||||||| |||||||| | ||| || || Sbjct 17438 AATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTATCTTGGATTTTGGATTTGACATT 17497 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || ||||| ||||| | || || || || ||||||| ||| ||||| Sbjct 17498 GTCGATAGTGTCAGAAGATTCAACTTCTAAAGTAATTGTTTTACCGGTCAAAGTTTTGAC 17557 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 17558 GAAAATTTGCAT 17569 >seq100 Length=74788 Score = 107 bits (118), Expect = 5e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||||| | || | |||||||| |||||||| || || || Sbjct 22450 TTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCGTCTTCCAATTGTTTACCAGCAAA 22509 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | |||||| | ||| || ||||||||||| || || || | ||| || || Sbjct 22510 GATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTATCTTGAATCTTAGATTTGACATT 22569 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| ||||| ||||| | || || || || || || | |||||||| Sbjct 22570 GTCGATGGTGTCGGAGGATTCGACTTCCAAGGTAATAGTTTTACCAGTTAAGGTCTTGAC 22629 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 22630 GAAAATTTGCAT 22641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179646676581458