Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq93 140 3e-28 seq100 138 1e-27 >seq93 Length=17569 Score = 140 bits (154), Expect = 3e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || | ||||||||||||||||| || ||||| | ||| || Sbjct 17127 CTCAAGACCAAGTGTAAGGTTGATTCCTTTTGGATGTTGTAATCAGATAAAGTTCTACCG 17186 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || |||||||| || ||| | ||||||| ||| || || || ||||| ||||||||| Sbjct 17187 TCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTA 17246 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| ||||| ||||| || | ||||| ||||| || ||||| | ||||| Sbjct 17247 TCTTGGATTTTGGATTTGACATTGTCGATAGTGTCAGAAGATTCAACTTCTAAAGTAATT 17306 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| ||||| | |||||| || ||||||||||| Sbjct 17307 GTTTTACCGGTCAAAGTTTTGACGAAAATTTGCAT 17341 Score = 140 bits (154), Expect = 3e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || | ||||||||||||||||| || ||||| | ||| || Sbjct 17355 CTCAAAACCAAGTGTAAGGTTGATTCCTTTTGGATGTTGTAATCAGATAAAGTTCTACCG 17414 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || |||||||| || ||| | ||||||| ||| || || || ||||| ||||||||| Sbjct 17415 TCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTA 17474 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| ||||| ||||| || | ||||| ||||| || ||||| | ||||| Sbjct 17475 TCTTGGATTTTGGATTTGACATTGTCGATAGTGTCAGAAGATTCAACTTCTAAAGTAATT 17534 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| ||||| | |||||| || ||||||||||| Sbjct 17535 GTTTTACCGGTCAAAGTTTTGACGAAAATTTGCAT 17569 >seq100 Length=74788 Score = 138 bits (152), Expect = 1e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | |||| || |||||||||||||| || || ||| | ||| || Sbjct 22427 CTCAAGACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCG 22486 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || ||||||||||| || || | ||||||| ||| || || || ||||| ||||||||| Sbjct 22487 TCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTA 22546 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||||||| || ||||| || | ||||||||| || |||||||| | |||| Sbjct 22547 TCTTGAATCTTAGATTTGACATTGTCGATGGTGTCGGAGGATTCGACTTCCAAGGTAATA 22606 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||| || |||| || || || |||||||||||| Sbjct 22607 GTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATC 22642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452000312829560