Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq154 104 3e-17 >seq154 Length=15437 Score = 104 bits (114), Expect = 3e-17 Identities = 352/545 (65%), Gaps = 19/545 (3%) Strand=Plus/Plus Query 116064 CCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGG 116123 |||||||||||| || | ||||||| || || || ||||| | ||| || ||||| || Sbjct 11464 CCACATATCAAATTGTAAAATACCTTCAGATGCAGGAGATCCTTGAAAAGTTTCATAAGG 11523 Query 116124 GCCCTCAACCTCCGCCAATTCGGAGCTC--GCCTCGAGGGCTGCGTGATACATTGTCTCA 116181 || || | | ||| | || || || || ||||| ||||| || || ||| Sbjct 11524 ACCATCTTGAATAGATAGTTC--AACTGAGGCTTCAAGTGCTGCATGATAGATAGTTTCA 11581 Query 116182 AAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATA 116241 || || || ||| | | ||| || | || || ||||| | | | | | | Sbjct 11582 AATATTTGAATATTTAGTTTCTTAGCTGCTTCAGATTCAAATGGCAATCTAAGCTCAGCA 11641 Query 116242 AATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTT 116301 |||| ||| || | ||||| ||||| | ||||||| ||||||| |||| |||||| Sbjct 11642 AATAAATCAGCCAATCCTTGAACACCCAAAGCAATTGGACGATGTCGTTTATTTGACTTT 11701 Query 116302 CGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACA 116361 || || | || || || | | ||| ||||| | || | |||||| || | Sbjct 11702 TCGGCTGTTTTAACTGGGTACATTGTTACATCAATAACTTTGTTCAAATTTTTAGTCAAC 11761 Query 116362 ACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTC---TCTTCAT----- 116413 ||||| | | ||| | || || ||||||| | | | || ||||||| Sbjct 11762 ACCTTGGCAACAGAATGTAATTTCTCAAAATCAAA--TTCAA-TCACTTCTTCATCACCT 11818 Query 116414 ----TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 116469 | | |||| | || | || | ||| | || ||||| |||| || || || Sbjct 11819 GTTTTCAAATACATTGGTAATGCAAGTGATCCAAGGTTACATACAGCTGTTTCTTCTGGT 11878 Query 116470 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 116529 || || || |||||||| ||| ||||| || || |||||||| || |||||| Sbjct 11879 GAAGAATATTCAATAATTTCACAACATAAATTGGATGATTTGATGGTGCCTAAATTCTTT 11938 Query 116530 TGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTT 116589 || || || ||||||||||| ||||| || || ||||||||||| || || || ||| Sbjct 11939 TGGTTCGATTTTGTGTTACATGCATCTTTATAAAGCATATATGGACCTCCAGTTTCTGTT 11998 Query 116590 TGGGA 116594 || || Sbjct 11999 TGTGA 12003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613503281222760