Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq458 141 1e-28 >seq458 Length=122000 Score = 141 bits (156), Expect = 1e-28 Identities = 195/273 (71%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 153747 GATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCAT 153806 ||||||||| | |||| | |||||| |||||| |||| | || ||||| ||||||||| Sbjct 117149 GATATTGCTTTGGGTACTTCGCAAAGATTTGGTGTTCCATTTGGTTATGGTGGTCCTCAT 117208 Query 153807 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 153866 |||||||| |||||||| || || || ||||| || || || |||||||| ||| Sbjct 117209 GCTGCATTTTTTGCAACTTCATCAAAATACGCTAGAAAAATCCCAGGAAGAATTGTTGGT 117268 Query 153867 CAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 153926 || |||||| |||||| ||| | | ||||| |||| |||||||| || Sbjct 117269 ATTTCTAAAGATAGATTAGGTAAGCCAGCTTTACGTTTAGCTTTACAAACTAGAGAACAA 117328 Query 153927 CATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAAT 153986 ||||||| |||||| || || || ||||| || || || || || | | |||||| Sbjct 117329 CATATCAAGAGAGAAAAGGCTACTTCCAACATTTGTACTGCCCAAGCTTTATTAGCTAAT 117388 Query 153987 ATGTCTGGATTCTATGCAGCATATCATGGTGCA 154019 || |||| ||||| | ||||||||| || Sbjct 117389 ATTTCTGCTAATTATGCTGTTTATCATGGTCCA 117421 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 153207 ATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTGAG 153266 || ||| |||| || || || ||| ||| || || || || |||| ||||||| Sbjct 116594 ATTGGTAAAGGTTATGCCGGTACTATTTTACCTCCTGTTATTCAAAGAAATCTTCTTGAA 116653 Query 153267 AATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTG 153326 ||| ||||| || ||||| ||||| |||||| | || || ||||| || ||||| Sbjct 116654 TCTCCAGAATGGTATACTTCTTATACTCCATATCAACCAGAAATTTCTCAAGGTAGATTA 116713 Query 153327 GAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAAC 153386 | | || || ||||||||||| | ||||| |||||||| || || || || Sbjct 116714 AATTCCTTGTTAAATTACCAAACTTTAATCACCTCTCTTACAGGCTTGGATATGGCCAAT 116773 Query 153387 GCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428 || ||| | |||||||||| ||||| || | ||||| ||| Sbjct 116774 GCTTCTTTGTTAGATGAAGGTACTGCTGCTGGTGAAGCTATG 116815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579209100278240