Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq458 132 6e-26 >seq458 Length=122000 Score = 132 bits (146), Expect = 6e-26 Identities = 193/273 (71%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 158422 GACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCAT 158481 || |||||| | |||| | |||||| |||||| |||| | || || || ||||||||| Sbjct 117149 GATATTGCTTTGGGTACTTCGCAAAGATTTGGTGTTCCATTTGGTTATGGTGGTCCTCAT 117208 Query 158482 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 158541 |||||||| |||||||| || || || ||||| || || || |||||||| ||| Sbjct 117209 GCTGCATTTTTTGCAACTTCATCAAAATACGCTAGAAAAATCCCAGGAAGAATTGTTGGT 117268 Query 158542 CAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 158601 || |||||| |||||| ||| | | ||||| |||| |||||||| || Sbjct 117269 ATTTCTAAAGATAGATTAGGTAAGCCAGCTTTACGTTTAGCTTTACAAACTAGAGAACAA 117328 Query 158602 CATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAAT 158661 ||||||| ||||| || || || ||||| || || || ||||| | | |||||| Sbjct 117329 CATATCAAGAGAGAAAAGGCTACTTCCAACATTTGTACTGCCCAAGCTTTATTAGCTAAT 117388 Query 158662 ATGTCTGGGTTCTATGCAGCATATCATGGTGCA 158694 || |||| ||||| | ||||||||| || Sbjct 117389 ATTTCTGCTAATTATGCTGTTTATCATGGTCCA 117421 Score = 98.7 bits (108), Expect = 1e-15 Identities = 177/256 (69%), Gaps = 2/256 (1%) Strand=Plus/Plus Query 159546 TATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGA-TAT 159604 ||| |||||||| |||||||| || ||||| | |||||| || ||| | || ||| Sbjct 118288 TATCATGATTACTTATCCATCAACTTATGGTTTGTTTGAACCAGGTGTCAAAAAGGCTAT 118347 Query 159605 GTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCAC 159664 | | ||||||||||| |||||||| || ||||| |||||||| || | ||||| | Sbjct 118348 -TGATATTGTTCATGAACATGGTGGTTTAGTTTATCTCGATGGTGCCAACATGAATGCTC 118406 Query 159665 AGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATA 159724 | || ||| || | ||| |||| | || || ||||| |||||| | || | || | Sbjct 118407 AAGTTGGTTTAACTTCCCCAGGTGATTTAGGCGCTGATGTTTGTCATTTGAATATTCACA 118466 Query 159725 AGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAA 159784 | ||||| | | ||||| || || ||||| || || ||| || |||| | Sbjct 118467 AAACATTTGCTTTAAGTCATGGTGGAGGTGGTCCAGGTCAAGCTCCAGTTTGTGTTAAAG 118526 Query 159785 AACATCTCACACCATT 159800 ||||| | | |||||| Sbjct 118527 AACATTTGAAACCATT 118542 Score = 82.4 bits (90), Expect = 9e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 157911 ACCCCCAGTCATACAGCGAAACGTTCTTGAGAATCCTAGTTGGTACACATCTTACACTCC 157970 ||| || || || || |||| ||||||| ||| ||||| || ||||| ||||| Sbjct 116623 ACCTCCTGTTATTCAAAGAAATCTTCTTGAATCTCCAGAATGGTATACTTCTTATACTCC 116682 Query 157971 CTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCAT 158030 |||||| | || || ||||| || ||||| | | || || ||||||||||| | || Sbjct 116683 ATATCAACCAGAAATTTCTCAAGGTAGATTAAATTCCTTGTTAAATTACCAAACTTTAAT 116742 Query 158031 CACAGAACTCACAGGACTACCGATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGC 158090 ||| || ||||| | || || || || ||| | |||||||||| ||||| || Sbjct 116743 CACCTCTCTTACAGGCTTGGATATGGCCAATGCTTCTTTGTTAGATGAAGGTACTGCTGC 116802 Query 158091 AGCAGAAGCAATG 158103 | ||||| ||| Sbjct 116803 TGGTGAAGCTATG 116815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588047443822960