Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq442 118 1e-21 seq162 84.2 3e-11 >seq442 Length=162164 Score = 118 bits (130), Expect = 1e-21 Identities = 310/471 (66%), Gaps = 24/471 (5%) Strand=Plus/Minus Query 104857 TATTCTTAAAGAATTATTATGGGTGATGAAAGGTTTAACAAATTCTAACTTGTTAAATGA 104916 |||| || | |||||||||||| | || || | ||| || |||| | |||| | Sbjct 130186 TATTATTCATGAATTATTATGGTTTATTGCTGGATCAACCGATGCTAAAATATTAACCAA 130127 Query 104917 AATTGGTGTTAAAGTATGGAATGATAATGGTTCACGTAAGTTTTTAGATTCTTGTGGATT 104976 | || || ||| ||||| | | |||||| || ||| | | |||||| | ||||| Sbjct 130126 CAAGGGAGTCAAAATATGGGAAGGTAATGGATCCCGTGAATATTTAGACAAATTGGGATT 130067 Query 104977 ---TCACTTTCGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGC 105033 |||| ||| ||||||||||| |||||| | |||||||| |||||||||||| Sbjct 130066 AACTCACCGTCGT---GAAGGTGATTTGGGACCAGTATATGGATTCCAATGGAGACATTT 130010 Query 105034 TGGAGCTCAATATATCGACTGTGATACCGACTATACCGGCCAAGGTATAGACCAATTAAG 105093 ||| ||| |||||| | |||||| | || ||||| || |||||| || |||||| Sbjct 130009 TGGTGCTGAATATAAAAATTGTGATGCTGATTATACTGGGCAAGGTTATGATCAATTA-- 129952 Query 105094 TCAAGTTATA---GAAACTATAAAAAATAACCCCGGGTGTCGAAGAATAATTATAGATAG 105150 |||| |||| ||| |||| | |||||| | |||||||||| || | Sbjct 129951 -CAAGATATAATTAAAAAATTAAAGACTAACCCATATGATAGAAGAATAATCATGAGTGC 129893 Query 105151 TTGGAATGTGTCACAATTATCAGATATGGCTCTTCCACCGTGTCATTGTTTGGTACAATT 105210 ||||| || | || | |||||| | || || |||||| ||| ||||| Sbjct 129892 ATGGAACCCTCCAGATTTCGACAAGATGGCTTTACCTCCATGTCATGTTTTCTGTCAATT 129833 Query 105211 TTACATT----------AGAA--ATAAAATTTATTTAGATTGTCAATTGTATCAAAGATC 105258 ||| || |||| |||| | | || ||| |||||||||||||| Sbjct 129832 TTATGTTAACTTCCCAGAGAATGCTAAACCTAAGTTGTCATGTTTGTTGTATCAAAGATC 129773 Query 105259 TGCAGATTTAGGATTAGGTGTACCATATAATATTGGTTTCTATTCATTTTT 105309 | ||| | ||||| ||||| || | |||||||| | ||| |||| || Sbjct 129772 TTGTGATATGGGATTGGGTGTTCCTTTTAATATTGCCTCTTATGCATTATT 129722 >seq162 Length=11089 Score = 84.2 bits (92), Expect = 3e-11 Identities = 143/203 (70%), Gaps = 6/203 (3%) Strand=Plus/Minus Query 98696 ATTAAAGTTGCCCAGTTGAGTGGTTACATTGCGGAACAAACTGATTATAAACACGGTGAA 98755 ||||||||||| || || |||||| | ||| | || | |||| | || |||||| Sbjct 1958 ATTAAAGTTGCTCAATTAGCTGGTTATGTAAGTGAAAACACCGGTTATCATCATGGTGAA 1899 Query 98756 CAAAACCTTTGTG-AAACAATAATAAAATTTGCACAAGATTTTGTGGGTACAAATAATAT 98814 | || | || ||| | ||||| || ||| |||||| ||||||| ||| | |||||||| Sbjct 1898 C-AATCTTTAGTGCAGACAATTATTGGATTGGCACAAAATTTTGTTGGTTCCAATAATAT 1840 Query 98815 AACACTACTT--GAGCCAGATGGTCAGTTTGGTACCAGACTTGAAGGAGGTAAAGATTCG 98872 || || || ||||| |||| ||||||| ||| || || |||||||||| Sbjct 1839 --CAATATTTTGAAGCCAAATGGGTCCTTTGGTAGTAGAGCTGCCGGTGGTAAAGATTTC 1782 Query 98873 GCTGCATCAAGGTATATTTATAC 98895 |||| | || ||||||| ||| Sbjct 1781 TCTGCTGCGAGATATATTTTTAC 1759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658398994449560