Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq510 345 5e-90 >seq510 Length=157725 Score = 345 bits (382), Expect = 5e-90 Identities = 618/898 (69%), Gaps = 21/898 (2%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 |||||| || ||||||||| || ||||| |||||||||| || || || || | Sbjct 114895 CATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCGAAAAAGTTAGTTTTACCGGC 114836 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATA------TAGTACT 36985 | || ||||||||||| |||||||||||||| | |||||| | || ||| Sbjct 114835 CAAGGAGATATTTTCCATGAAATCAAATGGATTGGTAACATTATAAACTTTCTTATTACC 114776 Query 36986 ACATGATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTC 37045 | | ||| | || | |||| |||||| |||| | |||| |||||||| | Sbjct 114775 CAAAGCAAATA-----ATAATC-TATCAGCAACATATTCAACATATTGACACATTAAATT 114722 Query 37046 ATAGTTTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTAT 37105 | | || ||||| | || ||||||| ||||| || | || |||||| ||| Sbjct 114721 AGAATTCATACCTAATAAAGAAACTGGAAGAGCATCAGTAAAATATTCTTTTTCAATTTC 114662 Query 37106 TACAGCATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATTT 37165 ||||| || || || || ||| || |||| || ||| || || ||||| Sbjct 114661 AACAGCTTCAACAATGATTTTTTCAACAATTTCTGGAGATGGTCTATTTTGTAAATGGGA 114602 Query 37166 AAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGA 37225 || |||||||| ||||||||| |||||||||||||||||||| || |||||||| || Sbjct 114601 GAATAATAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTCATTGGA 114542 Query 37226 AAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCC 37285 || || || |||||||| |||||||| ||||| | |||||| || | ||||| || || Sbjct 114541 GAAAGTCAAACCTGGCATCAAACCTCTCTTTTTTAACCAAAAGATAGAAGCAAATGAACC 114482 Query 37286 AGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGT---GTACCGAAAGTTGA 37342 | ||||||||||||||||| || ||||| || || | | | | | |||| | Sbjct 114481 ACTAAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAG--CA 114424 Query 37343 ACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGT 37402 || | ||| |||||||| | | |||||| || ||| ||| |||| ||| | Sbjct 114423 TCT-TTATCTTGGATCCATTTAATGGCCCAATCAGCTTTTTTGGTAATACATGGAATATT 114365 Query 37403 TTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAG 37462 |||||| || || || | || | ||||| |||| | | |||||| ||||| | Sbjct 114364 TTCAATGGCATTAAATAAGAAATCAGCTTCTTGTGGATCTTTAACATAAGTTTCAATCAA 114305 Query 37463 TAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCT 37522 |||| |||||||||||| ||||| ||||| || || |||||||||||||| | | Sbjct 114304 TAAAGAATACATTTCAGAATGAATGTTTTCCATCATAATTTGAAAACCATAAAATGATTT 114245 Query 37523 AGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCC 37582 |||||| | | |||||| || | |||| | | | |||| |||||||||||||| || Sbjct 114244 AGCTTCTGGCAGTTGAACTTCAGCAGAAAAATTTTCAACTAAATTTTCATTAACTATACC 114185 Query 37583 ATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAA 37642 ||| || ||||| || || | ||| ||||| | |||||||| || | ||| Sbjct 114184 ATCTGATGCAGCAAAAAAGGCCAAAACTCTAGAAATAAAGTATCTTTCATTATCAGTTAA 114125 Query 37643 T---TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACT 37699 | || |||||||||| | |||||| |||||||||||| ||| | |||||||| Sbjct 114124 TTTATTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCAGCTGTCCAAAAGGA 114065 Query 37700 TGCCAATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACA 37757 || || |||||| | ||||||| |||| | || |||||||| || ||| Sbjct 114064 AGCTTCAGCTTTTTTATAAAAATTCCAAATTTCATGGTATTTAATTGGAAACATAACA 114007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592313016576440