Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq93 161 8e-35 seq100 149 5e-31 >seq93 Length=17569 Score = 161 bits (178), Expect = 8e-35 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | ||||| || || | ||| ||||| ||||| || |||||||| | Sbjct 17343 CCACCTCTCAATCTCAAAACCAAGTGTAAGGTTGATTCCTTTTGGATGTTGTAATCAGAT 17402 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| | || || ||||| ||||| || || ||||| | |||||||| || ||| Sbjct 17403 AAAGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGGA 17462 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||||||||| ||||| ||| ||| | || | ||||||||| | ||| ||| Sbjct 17463 ATACCTTCTTTATCTTGGATTTTGGATTTGACATTGTCGATAGTGTCAGAAGATTCAACT 17522 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||| | ||||| ||||| |||||||| || || || ||||| Sbjct 17523 TCTAAAGTAATTGTTTTACCGGTCAAAGTTTTGACGAAAATTTGCAT 17569 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | || || || || | ||| ||||| ||||| || |||||||| | Sbjct 17115 CCACCTCTCAATCTCAAGACCAAGTGTAAGGTTGATTCCTTTTGGATGTTGTAATCAGAT 17174 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| | || || ||||| ||||| || || ||||| | |||||||| || ||| Sbjct 17175 AAAGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGGA 17234 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||||||||| ||||| ||| ||| | || | ||||||||| | ||| ||| Sbjct 17235 ATACCTTCTTTATCTTGGATTTTGGATTTGACATTGTCGATAGTGTCAGAAGATTCAACT 17294 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||| | ||||| ||||| |||||||| || || || ||||| Sbjct 17295 TCTAAAGTAATTGTTTTACCGGTCAAAGTTTTGACGAAAATTTGCAT 17341 >seq100 Length=74788 Score = 149 bits (164), Expect = 5e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | || || || || | ||||||||| ||||| || ||||| |||| Sbjct 22415 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCGGAC 22474 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| | || |||||||| ||||| ||||| ||||| | |||||||| || ||| Sbjct 22475 AAAGTTCTACCGTCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGA 22534 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||||||||||||||| || ||| ||| | || | ||||| || | ||| ||| Sbjct 22535 ATACCTTCTTTATCTTGAATCTTAGATTTGACATTGTCGATGGTGTCGGAGGATTCGACT 22594 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | || | ||||| || ||||| || || || || || ||||| Sbjct 22595 TCCAAGGTAATAGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 22641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396275932052427