Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq93 91.5 1e-13 >seq93 Length=17569 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| ||||| |||| || || ||||| || ||||||||||||| | ||| | |||| Sbjct 17129 CAAGACCAAGTGTAAGGTTGATTCCTTTTGGATGTTGTAATCAGATAAAGTTCTACCGTC 17188 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 || || || ||||| || || |||| || |||||||| | |||| || || || || Sbjct 17189 TTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTATC 17248 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 || || ||| ||| | | || || || | || || || | ||||| || Sbjct 17249 TTGGATTTTGGATTTGACATTGTCGATAGTGTCAGAAGATTCAACTTCTAAAGTAATTGT 17308 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| || ||||||||||| || ||||| ||||| Sbjct 17309 TTTACCGGTCAAAGTTTTGACGAAAATTTGCAT 17341 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| ||||| |||| || || ||||| || ||||||||||||| | ||| | |||| Sbjct 17357 CAAAACCAAGTGTAAGGTTGATTCCTTTTGGATGTTGTAATCAGATAAAGTTCTACCGTC 17416 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 || || || ||||| || || |||| || |||||||| | |||| || || || || Sbjct 17417 TTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTATC 17476 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 || || ||| ||| | | || || || | || || || | ||||| || Sbjct 17477 TTGGATTTTGGATTTGACATTGTCGATAGTGTCAGAAGATTCAACTTCTAAAGTAATTGT 17536 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| || ||||||||||| || ||||| ||||| Sbjct 17537 TTTACCGGTCAAAGTTTTGACGAAAATTTGCAT 17569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380935227592053