Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq458 123 3e-23 >seq458 Length=122000 Score = 123 bits (136), Expect = 3e-23 Identities = 191/273 (70%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 139268 TGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCA 139327 || ||||||||| | ||||| |||| ||||| || | | ||||| || || || Sbjct 117421 TGGACCATGATAAACAGCATAATTAGCAGAAATATTAGCTAATAAAGCTTGGGCAGTACA 117362 Query 139328 GATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCT 139387 ||||| || || || ||||| | ||||| || ||||||||||||| ||||| | Sbjct 117361 AATGTTGGAAGTAGCCTTTTCTCTCTTGATATGTTGTTCTCTAGTTTGTAAAGCTAAACG 117302 Query 139388 GTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCT 139447 | || || || ||| || || || ||| |||||||| || || || ||||| Sbjct 117301 TAAAGCTGGCTTACCTAATCTATCTTTAGAAATACCAACAATTCTTCCTGGGATTTTTCT 117242 Query 139448 CTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAAT 139507 || || || |||||||| ||||||||||||||||| || || || | |||| Sbjct 117241 AGCGTATTTTGATGAAGTTGCAAAAAATGCAGCATGAGGACCACCATAACCAAATGGAAC 117182 Query 139508 ACCAAACCTTTGCATACTACCTACAGCAATATC 139540 |||||| |||||| | |||| | ||||||||| Sbjct 117181 ACCAAATCTTTGCGAAGTACCCAAAGCAATATC 117149 Score = 107 bits (118), Expect = 2e-18 Identities = 179/256 (70%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 138162 AATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGT 138221 |||||| | | ||||| | |||| || ||| || || ||||| || || ||||| Sbjct 118542 AATGGTTTCAAATGTTCTTTAACACAAACTGGAGCTTGACCTGGACCACCTCCACCATGA 118483 Query 138222 GGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGT 138281 | | ||||| || || | ||| | |||||| ||||| || || | |||| ||| Sbjct 118482 CTTAAAGCAAATGTTTTGTGAATATTCAAATGACAAACATCAGCGCCTAAATCACCTGGG 118423 Query 138282 TTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTG 138341 | || ||| || || ||||| | || |||||||||||||| || |||||||| Sbjct 118422 GAAGTTAAACCAACTTGAGCATTCATGTTGGCACCATCGAGATAAACTAAACCACCATGT 118363 Query 138342 TCATGAACGATCTTACATA-TCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGG 138400 |||||||| || | | ||| || | ||| || |||||| | ||||| ||| ||||| Sbjct 118362 TCATGAACAATATCA-ATAGCCTTTTTGACACCTGGTTCAAACAAACCATAAGTTGATGG 118304 Query 138401 ATATGTAATCATAATA 138416 ||| |||||||| ||| Sbjct 118303 ATAAGTAATCATGATA 118288 Score = 89.7 bits (98), Expect = 6e-13 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 ||| || || | || ||||| |||||||||| | ||| || || || || || || Sbjct 116815 CATAGCTTCACCAGCAGCAGTACCTTCATCTAACAAAGAAGCATTGGCCATATCCAAGCC 116756 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 |||||| ||||| | ||||||||||| || || | | ||||| || ||||| || Sbjct 116755 TGTAAGAGAGGTGATTAAAGTTTGGTAATTTAACAAGGAATTTAATCTACCTTGAGAAAT 116696 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038 || | |||||| ||||| ||||| || ||||| ||| ||||||| |||| || Sbjct 116695 TTCTGGTTGATATGGAGTATAAGAAGTATACCATTCTGGAGATTCAAGAAGATTTCTTTG 116636 Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACCTAT 140080 || || || ||| ||| || || || |||| ||| || Sbjct 116635 AATAACAGGAGGTAAAATAGTACCGGCATAACCTTTACCAAT 116594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578994701647720