Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq510 329 6e-85 seq93 167 5e-36 seq100 156 8e-33 >seq510 Length=157725 Score = 329 bits (364), Expect = 6e-85 Identities = 585/854 (69%), Gaps = 14/854 (2%) Strand=Plus/Minus Query 49592 CATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATA-CATATAATA 49650 ||| |||||||||||||| | ||||||| ||| | | || | | | || |||||| Sbjct 114820 CATGAAATCAAATGGATTGGTAACATTATAAACTTTCT-TATTACCCAAAGCAAATAATA 114762 Query 49651 ATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAATAATT 49710 ||||||| || ||| ||||||||||||| ||||||| | | |||||||||| ||||| Sbjct 114761 ATCTATCAGCAACATATTCAACATATTGACACATTAAATTAGAATTCATACCTAATAAAG 114702 Query 49711 TAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattatca 49770 || ||| | |||||| || | |||||||||| ||||| ||||||| ||| || Sbjct 114701 AAACTGGAAGAGCATCAGTAAAATATTCTTTTTCAATTTCAACAGCTTCAACAATGATTT 114642 Query 49771 taattatattattttttgataatttatatttaatatgattcgcatatattaaACATGCAA 49830 | || | |||| | || | | ||||| || || | ||| |||||| |||| Sbjct 114641 T--TTCAACAATTTCTGGAGATGGTCTATTTTGTAA-ATGGGAGAATAATAAACAAGCAA 114585 Query 49831 AATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCA 49890 |||||||||||||||| || || ||| | || |||||||| ||||| || ||||||| Sbjct 114584 AATCAGTATGTAAACCTTCATCTCTACAAATTAATTCATTGGAGAAAGTCAAACCTGGCA 114525 Query 49891 TTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCT 49950 | || ||||||||||| | |||||| || || ||||| || | |||||| ||||| | Sbjct 114524 TCAAACCTCTCTTTTTTAACCAAAAGATAGAAGCAAATGAACCACTAAAGAAAATACCTT 114465 Query 49951 CGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATC---ATCTAATATCC 50007 | | | ||||| || | | |||| | || | ||| ||| |||| |||| Sbjct 114464 CAATAGCAGCAAAAGCAACCAATCTTTCAGCATA---TAAAGCATCTTTATCTTGGATCC 114408 Query 50008 AATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATA 50067 | || || |||||||| |||||||| | ||| | || |||||||| || || ||||||| Sbjct 114407 ATTTAATGGCCCAATCAGCTTTTTTGGTAATACATGGAATATTTTCAATGGCATTAAATA 114348 Query 50068 ATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACATTTCAG 50127 | || ||| | || ||||||||||||||||||| Sbjct 114347 AGAAATCAGCTTCTTGTGGATCTTTAACATAAGTTTCAATCAATAAAGAATACATTTCAG 114288 Query 50128 AATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATACTGAA 50187 |||| | |||||| |||||||| ||||||| | | ||||||| |||| Sbjct 114287 AATGAATGTTTTCCATCATAATTTGAAAACCATAAAATGATTTAGCTTCTGGCAGTTGAA 114228 Query 50188 CTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGAAGA 50247 |||| | | | || |||||||||||| ||| || |||||||| ||||| || || | Sbjct 114227 CTTCAGCAGAAAAATTTTCAACTAAATTTTCATTAACTATACCATCTGATGCAGCAAAAA 114168 Query 50248 ATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAA---ATTTTCCCAAGATT 50304 | || ||||| |||||| | | |||||||||| |||| ||| | |||| | Sbjct 114167 AGGCCAAAACTCTAGAAATAAAGTATCTTTCATTATCAGTTAATTTATTGTTCCAATCAT 114108 Query 50305 CAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATTTTTTAT 50364 | | ||| || |||||| |||||||| ||||||||| || ||| | | |||||||| Sbjct 114107 CCAAATCTTTACTTAAATCAACTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTTTTAT 114048 Query 50365 ACATTTGATATATATCAAAATGTTCAATGGGAAATAGTACATATCGTTTAGTAttttttt 50424 | | | | || ||| | || ||| ||||| | ||||| || | |||| || Sbjct 114047 AAAAATTCCAAATTTCATGGTATTTAATTGGAAACATAACATAACGACGTTTGTTTTCTT 113988 Query 50425 CTAATATCGGTTCT 50438 ||||| |||||| Sbjct 113987 TTAATAATGGTTCT 113974 >seq93 Length=17569 Score = 167 bits (184), Expect = 5e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | || || || ||||| || | || || ||| || |||||| Sbjct 17340 ATACCACCTCTCAATCTCAAAACCAAGTGTAAGGTTGATTCCTTTTGGATGTTGTAATCA 17399 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 ||||| |||| | || || |||||||||||||| || || ||||| |||||||||||| Sbjct 17400 GATAAAGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCAGGT 17459 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| ||||| ||| ||||| |||| || || ||||| Sbjct 17460 GGAATACCTTCTTTATCTTGGATTTTGGATTTGACATTGTCGATAGTGTCAGAAGATTCA 17519 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| |||||| |||||||| || || ||||| | || || ||||| Sbjct 17520 ACTTCTAAAGTAATTGTTTTACCGGTCAAAGTTTTGACGAAAATTTGCAT 17569 Score = 165 bits (182), Expect = 2e-35 Identities = 175/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192306 AATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATC 192365 || ||||||||| | | || || || ||||| || | || || ||| || ||||| Sbjct 17111 AAAACCACCTCTCAATCTCAAGACCAAGTGTAAGGTTGATTCCTTTTGGATGTTGTAATC 17170 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 |||||| |||| | || || |||||||||||||| || || ||||| ||||||||||| Sbjct 17171 AGATAAAGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCAGG 17230 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 ||| || |||||||||||||| ||||| ||| ||||| |||| || || ||||| Sbjct 17231 TGGAATACCTTCTTTATCTTGGATTTTGGATTTGACATTGTCGATAGTGTCAGAAGATTC 17290 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| |||||| |||||||| || || ||||| | || || ||||| Sbjct 17291 AACTTCTAAAGTAATTGTTTTACCGGTCAAAGTTTTGACGAAAATTTGCAT 17341 >seq100 Length=74788 Score = 156 bits (172), Expect = 8e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | || || || || || |||| || || ||| || || || || Sbjct 22414 ACCACCTCTCAATCTCAAGACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCGGA 22473 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || |||| | || ||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 22474 CAAAGTTCTACCGTCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGG 22533 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || |||||||||||||| || ||| ||| ||||| || | || || ||||| || Sbjct 22534 AATACCTTCTTTATCTTGAATCTTAGATTTGACATTGTCGATGGTGTCGGAGGATTCGAC 22593 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||| | ||||| |||||||||||||| || || | || || ||||| || Sbjct 22594 TTCCAAGGTAATAGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATCTT 22644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984473554424850