Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq510 203 1e-46 seq476 163 8e-35 seq154 114 4e-20 seq185 102 2e-16 seq21 89.7 2e-12 seq137 87.8 5e-12 >seq510 Length=157725 Score = 203 bits (224), Expect = 1e-46 Identities = 515/767 (67%), Gaps = 25/767 (3%) Strand=Plus/Plus Query 133078 TGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAACAGCAAGATTT 133137 ||||||||| |||||||| || | || |||||| | | ||||||||| ||| || Sbjct 114007 TGTTATGTTTCCAATTAAATACCATGAAATTTGGAATTTTTATAAAAAAGCTGAAGCTTC 114066 Query 133138 ATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGACCCAGCCCACTGGGA--AGCCCTT 133195 |||||||| | ||||| |||||| ||||| | | ||| | | || Sbjct 114067 CTTTTGGACAGCTGAAGAAGTTGATTTAAGTAAAGATTTGGATGATTGGAACAATAAATT 114126 Query 133196 A-CTGGGGATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGAGTGATGG 133254 | ||| |||||| | | |||||||||| |||| || ||||||||||| ||||| Sbjct 114127 AACTGATAATGAAAGATACTTTATTTCTAGAGTTTTGGCCTTTTTTGCTGCATCAGATGG 114186 Query 133255 TATTGTTCTTGAAAATTTAG--GAACACGGTTTATGGGAGAAGTTCAACTGGCCGAAGCC 133312 ||| ||| ||||||||||| ||| | ||| | |||||||||||| | ||||| Sbjct 114187 TATAGTTAATGAAAATTTAGTTGAAAA--TTTTTCTGCTGAAGTTCAACTGCCAGAAGCT 114244 Query 133313 CGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACT 133372 | |||||||| | || ||| ||||||||| || |||||| | |||||| Sbjct 114245 AAATCATTTTATGGTTTTCAAATTATGATGGAAAACATTCATTCTGAAATGTATTCTTTA 114304 Query 133373 CTAATTGATACTTACATCAAAGATACCGTCCAGAAGC--ACAAACTATTCAACGCCATTA 133430 | ||||| ||||| | |||||| | | |||||| | |||| || |||||| Sbjct 114305 TTGATTGAAACTTATGTTAAAGAT--CCACAAGAAGCTGATTTCTTATTTAATGCCATT- 114361 Query 133431 GCGAAT-TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAG 133489 | ||| |||| ||||||| || ||| |||| ||||| |||||||||||||| || || Sbjct 114362 GAAAATATTCCATGTATTACCAAAAAAGCTGATTGGGCCATTAAATGGATCCAAGATAAA 114421 Query 133490 CGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGT 133549 ||| | |||| | | ||||||||||||| | || || ||||| || ||| Sbjct 114422 GATGCTTTATATGCTGAAAGATTGGTTGCTTTTGCTGCTATTGAAGGTATTTTCTTTAGT 114481 Query 133550 GGTGCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTT 133608 ||| | || ||| ||||| |||||| | |||||| | ||| | | || || || ||| Sbjct 114482 GGTTCATT-TGCTTCTATCTTTTGGTTAAAAAAGAGAGGTTTGATGCCAGGTTTGACTTT 114540 Query 133609 TTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTTACTTCA 133668 || || ||| | |||| || || || | | || || || ||||| |||| | Sbjct 114541 CTCCAATGAATTAATTTGTAGAGATGAAGGTTTACATACTGATTTTGCTTGTTTATTATT 114600 Query 133669 CTCTAAATT---AGAGCGACCA-CTCAAAAAGAATAAGATTGAAGAAATTATTAGAGAAG 133724 ||| | || | | ||||| ||| | || | ||||| |||| ||| |||| Sbjct 114601 CTCCCATTTACAAAATAGACCATCTCCAGAA----ATTGTTGAAAAAATCATTGTTGAAG 114656 Query 133725 CGGTTGAAATTGAGGTTGAATTTATCAATAGTGCTCTGCC-GTGCCGTTTAATTGGTATG 133783 | ||||||||||| |||| | | | | |||||| || || | |||| | |||||| Sbjct 114657 CTGTTGAAATTGAAAAAGAATATTTTACTGATGCTCTTCCAGTTTC-TTTATTAGGTATG 114715 Query 133784 AATGATGTGCTGATGCAGCGTTATATTGAATTTGTAGCTGACAGATT 133830 ||| | | ||| | ||| |||||| ||| ||||| ||||| Sbjct 114716 AATTCTAATTTAATGTGTCAATATGTTGAATATGTTGCTGATAGATT 114762 Score = 127 bits (140), Expect = 6e-24 Identities = 205/294 (70%), Gaps = 3/294 (1%) Strand=Plus/Minus Query 156026 TGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCG 156082 ||| |||| |||| |||||| ||| || ||| ||||| || || || || || Sbjct 72687 TGGTTCCAAGTACAAGGCAAAAGCACCTGGTCTTTTGTTACCACCTTGGTCAACGTAACG 72628 Query 156083 AGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC 156142 ||||| || || || || | | ||||||||| ||||||||||| || ||||| || || Sbjct 72627 GGCAGTGTTGTTAAAAACTCTGACCATAGGAATGATACCATTGGATGTACCATTAGTACC 72568 Query 156143 GCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCA 156202 ||| | | ||||| || |||| || ||||| || | ||||||||||| | | Sbjct 72567 AGCAATGTATGCACCAGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCACT 72508 Query 156203 TTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTC 156262 || |||||| ||| ||| || | ||||| | ||||||||||||||||||| || | Sbjct 72507 CTTGGAAATTAAAGCACATGATTTCAAAGTATCGTAAATACCTTCAATAGAATCGTCCTT 72448 Query 156263 CATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAA 156316 ||| | || | | || || | ||| |||| ||| || || |||||||| Sbjct 72447 CATAGCAAGCAAGAAACATGAGGACATTTGTGGTCTTGGGGTACCTGCGTTGAA 72394 >seq476 Length=110354 Score = 163 bits (180), Expect = 8e-35 Identities = 349/513 (68%), Gaps = 10/513 (2%) Strand=Plus/Minus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 |||||||| | ||||| | ||||||| || || ||||| | ||| || || | Sbjct 10831 CTATCAAAACGACCAGGTCTTAATAATGCTTTATCCAAAATATCTGGTCTATTAGTACCA 10772 Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTA 288969 || || ||||||| | || || | ||| |||||||| ||| | |||||| Sbjct 10771 GCTAAAACAACAACATGATCAGTAGTATCAAAACCATCCATTTCAACTAATAATTGATTT 10712 Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttA 289029 | || | ||| | ||||||||| ||||| | |||| || || | |||| |||| Sbjct 10711 AAAGTATTTTCACGTTCATCATT---ACCTCCT-AATCTACC--ATTACCTCTTTCTTTA 10658 Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCA-CACACGGAGAATTTTGTCTCGCAATTGC 289088 |||| ||||||||||| |||| ||||| | || | || | ||| ||| ||| || Sbjct 10657 CCAATGGCATCAATTTCATCAACAAAAATAATCAGA-GGTGCCATTTCTCTTGCAGTTTT 10599 Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148 |||||| || | || | || || |||| |||||| |||||||||||||||||||| | Sbjct 10598 AAATAAATCACGAACTCTTGAAGCACCAACCCCAACAAACATTTCTACAAATTCAGAACC 10539 Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208 || ||| | |||| || |||||| ||||| ||| | || | | || || Sbjct 10538 AGAAACTGATAAAAATGGAACTCCTGCTTCACCTGCAGTTGCTTTTGCTAATAAAGTTTT 10479 Query 289209 ACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTT 289268 ||| || || ||||| || ||||| | | || |||| | |||||| || | Sbjct 10478 ACCAGTACCTGGTGGACCAGATAATATAGCACCTCTTGGAATTTTTGCTCCTAATTTTTC 10419 Query 289269 ATATTTCTCAGGGCTCTT-TAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCAT 289327 |||||| | ||| |||| |||||||| |||| |||| || ||| | ||||| |||| Sbjct 10418 ATATTTTTGAGGA-TCTTGTAAAAATTTCACAAATTCCATAATTTCTTCTTTTGATTCAT 10360 Query 289328 CACATCCTGCTACATCAGCAAAAGTAATATTAA 289360 ||||||| || ||||| ||| |||| |||| Sbjct 10359 CACATCCAGCAACATCTTTAAATTTAATTTTAA 10327 >seq154 Length=15437 Score = 114 bits (126), Expect = 4e-20 Identities = 204/297 (69%), Gaps = 8/297 (3%) Strand=Plus/Plus Query 156063 CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCA 156122 ||||| ||||| || || | ||||| |||||||| |||| || ||| |||| | ||| Sbjct 12317 CCACCTTGATCAACGTATCTTGCAGTATTATTGAAAACACGTAACATTGGAACCAATCCA 12376 Query 156123 TTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATGT 156182 || ||||| |||||||| || ||||| |||||| || | || || ||||| ||| Sbjct 12377 TTTGAAGTTCCATTGGTACCAACAATATATGAACCAATGGATCTAATATCATGAACATGA 12436 Query 156183 AGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATA 156242 | ||||||||||| || ||| ||||| ||| |||| | | || || |||| Sbjct 12437 ATACCAATACCACCAGAGGCTTTGGAAATCAAAGCAGATTCATGAAGTGTTTTATAAATC 12496 Query 156243 CCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGA----ACTTAATTGAGGTCG 156298 || ||||||||||| |||| ||| | | || | | || || | || || | ||| Sbjct 12497 CCATCAATAGAATCTTCTTTCATGGCGATTAAAAAACAAGATGACAAATAGTTAAATTCG 12556 Query 156299 TGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355 || || || ||| ||||| ||||||||||||||||| || ||||| Sbjct 12557 ----CCACCTGCATTATATAAAGTAGGCAGGGCATGAATAAAATACTTCTTCGACAT 12609 >seq185 Length=96422 Score = 102 bits (112), Expect = 2e-16 Identities = 117/157 (75%), Gaps = 3/157 (2%) Strand=Plus/Plus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | || ||| || ||||| ||| || || |||||| | |||||| ||| Sbjct 91905 AGAATTTCCTTAAGACGAGGCACACCCAAGGTAACATT---CTTGGAGGAAACACCCGCA 91961 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 | ||||||||||||| || | ||| |||| ||| |||||||| |||||| |||| Sbjct 91962 TAATGGAAAGTATTCAATGTCATTTGGGTAGCTGGTTCACCAATGGATTGTGCAGCAACA 92021 Query 301933 ATACCAACCATTTCTCCTGGTGCTACAATAGACTTCT 301969 | |||||||||||| || || ||||| || |||| Sbjct 92022 ACACCAACCATTTCACCAGGGTGAACAATGGATTTCT 92058 >seq21 Length=54338 Score = 89.7 bits (98), Expect = 2e-12 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 251413 CCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTG 251472 |||||| | ||| |||||||| ||| |||||||||| || || | | |||| Sbjct 15294 CCACACATTCCACATACATGGACTCTGAAAGCATCAGAAGCTTCCATCAATCTTTCCTTC 15353 Query 251473 GTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGA 251532 ||| | || ||||| || | |||||||||||| | |||||| ||||||||||| | | Sbjct 15354 AAGAAACCAGCGGCACCATGGGCAATCATACAATCTCTCTCCATCTCACCGAAACGCAAA 15413 Query 251533 CCACCATCGCGAGCCCTACCCTCGGCAGGCTG 251564 |||||||| | || ||||| || |||| || Sbjct 15414 CCACCATCTCTAGATCTACCTTCAACAGGTTG 15445 >seq137 Length=51128 Score = 87.8 bits (96), Expect = 5e-12 Identities = 219/328 (67%), Gaps = 10/328 (3%) Strand=Plus/Plus Query 289021 CtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTC 289080 ||||| ||||| |||||| | ||| ||||| || || | || | |||| ||| Sbjct 25195 CTTTTACCACCAATAGCATCCAATTCATCAATAAAGATAATTGCTGGTGCTTTTTCTCTG 25254 Query 289081 GCA--ATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAA 289138 || |||| |||||||| | | | || || | ||||||||| | ||| ||| Sbjct 25255 GCTTGATTG--AATAATTCACGAATTCTCTTGGCACCTACACCAACATATAATTCATCAA 25312 Query 289139 ATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCA 289198 |||||||| | || | | |||| || ||||| ||||| ||| || |||| Sbjct 25313 ATTCAGAACCTGACATAAAGAAAAATGGAACTCCAGCTTCACCTGCAGTTGCTCTTGCCA 25372 Query 289199 GAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-C 289257 | || ||||| || || ||||| || |||| ||| || ||||||| ||| | | Sbjct 25373 ATAAAGTTTTACCGGTACCTGGTGGACCAGTCAATAAAACACCTTTTGGTAATTTCCCAC 25432 Query 289258 CCA--GCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCAT 289315 ||| |||| || |||| ||| ||||||||||| |||||||| || | |||| Sbjct 25433 CCAAGGCAG---TAAATTTAGAAGGATCTTTTAAAAATTCAACAATTTCTTCCAATTCAG 25489 Query 289316 ATTTTGCCTCATCACATCCTGCTACATC 289343 | | || |||||||||||| ||||| Sbjct 25490 CTCTGGCTTCATCACATCCTTGAACATC 25517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471807963734207