Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq442 145 1e-29 seq162 96.9 4e-15 >seq442 Length=162164 Score = 145 bits (160), Expect = 1e-29 Identities = 307/458 (67%), Gaps = 14/458 (3%) Strand=Plus/Minus Query 172401 GAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 172460 ||| | |||||| ||||| || ||||| ||| | ||| ||||| | | || || Sbjct 130176 GAATTATTATGGTTTATTGCTGGATCAACCGATGCTAAAATATTAACCAACAAGGGAGTC 130117 Query 172461 AAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGA 172520 ||| | ||| | | |||||| || ||||||| |||||| || || || ||| | | Sbjct 130116 AAAATATGGGAAGGTAATGGATCCCGTGAATATTTAGACAAATTGGGATTAACTCACCGT 130057 Query 172521 AAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATAT 172580 ||||||||||| || ||| | |||||||| |||||||||||| || ||| ||||| Sbjct 130056 CGTGAAGGTGATTTGGGACCAGTATATGGATTCCAATGGAGACATTTTGGTGCTGAATAT 129997 Query 172581 ATCGACTGTGATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAAACTATTAAT 172640 | | |||||| | ||||| || || ||||| || |||||| | | ||||| Sbjct 129996 AAAAATTGTGATGCTGATTATACTGGGCAAGGTTATGATCAATTACAAGATATAATTAAA 129937 Query 172641 ACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAGTTGGAATGTACCTCAA 172700 | ||| | | |||||| | |||||| || | || | ||||| || | Sbjct 129936 AAATTAAAGACTAACCCATATGATAGAAGAATAATCATGAGTGCATGGAACCCTCCAGAT 129877 Query 172701 CTTGATAAAATGGTTCTTCCTCCTTGCCATACTTTAGCACAATTTTATGT--------CA 172752 | || || |||| | | ||||| || ||| ||| ||||||||||| || Sbjct 129876 TTCGACAAGATGGCTTTACCTCCATGTCATGTTTTCTGTCAATTTTATGTTAACTTCCCA 129817 Query 172753 GaaaaaaaTCAATCTTAGATTGTCA-----GTTATATCAAAGATCAGCTGATTTAGGATT 172807 || || | || || || |||||| ||| ||||||||||| |||| | ||||| Sbjct 129816 GAGAATGCTAAACCTAAG-TTGTCATGTTTGTTGTATCAAAGATCTTGTGATATGGGATT 129758 Query 172808 GGGGGTACCTTATAATATTGGATTTTATTCATTTTTAA 172845 ||| || |||| |||||||| | |||| |||| |||| Sbjct 129757 GGGTGTTCCTTTTAATATTGCCTCTTATGCATTATTAA 129720 >seq162 Length=11089 Score = 96.9 bits (106), Expect = 4e-15 Identities = 147/203 (72%), Gaps = 6/203 (3%) Strand=Plus/Minus Query 165950 ATTAAGGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAGCATGGTGAA 166009 ||||| |||||||||||| ||| ||||| ||| | || | |||| | ||||||||| Sbjct 1958 ATTAAAGTTGCTCAATTAGCTGGTTATGTAAGTGAAAACACCGGTTATCATCATGGTGAA 1899 Query 166010 CAAAATTTATGTGAA-ACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATAT 166068 ||| |||| ||| | || || ||| || || ||| ||||||||||| | |||||||| Sbjct 1898 CAATCTTTA-GTGCAGACAATTATTGGATTGGCACAAAATTTTGTTGGTTCCAATAATAT 1840 Query 166069 AGCATTA-CTTGAA-CCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCT 166126 || || ||||| || |||| ||||||| ||| | || |||||||||| Sbjct 1839 --CAATATTTTGAAGCCAAATGGGTCCTTTGGTAGTAGAGCTGCCGGTGGTAAAGATTTC 1782 Query 166127 GCTGCATCAAGATATATTTATAC 166149 |||| | |||||||||| ||| Sbjct 1781 TCTGCTGCGAGATATATTTTTAC 1759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632485559972680