Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq100 132 4e-26 seq93 113 4e-20 >seq100 Length=74788 Score = 132 bits (146), Expect = 4e-26 Identities = 172/235 (73%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 110266 ATTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGG 110324 ||| || |||||||| || ||||| || ||||| || ||||| |||||| | ||| || Sbjct 22648 ATTAAAGATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACTATTACCTTGGAAGTCGA 22589 Query 110325 AGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCG 110384 | ||| ||| || ||| | | || ||| |||||| || |||||||| | || Sbjct 22588 ATCCTC-CGACACCATCGACAATGTCAAATCTAAGATTCAAGATAAAGAAGGTATTCCAC 22530 Query 110385 TGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGG 110444 |||||||||||| | || | ||| |||||||| |||| || | ||||| || | | Sbjct 22529 CTGATCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGACGGTAGAACTTTGTCCG 22470 Query 110445 ATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 | |||||||| ||||| |||||||| |||||| |||| || ||| || |||| || Sbjct 22469 ACTACAACATCCAAAAGGAATCTACCTTGCACTTGGTCTTGAGATTGAGAGGTGG 22415 >seq93 Length=17569 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || ||||||||||| ||||| ||||| ||||| | ||| || || Sbjct 17341 ATGCAAATTTTCGTCAAAACTTTGACCGGTAAAACAATTACTTTAGAAGTTGAATCTTCT 17282 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || ||| ||| | | || ||| || || || |||||||| | || |||||| Sbjct 17281 GACACTATCGACAATGTCAAATCCAAAATCCAAGATAAAGAAGGTATTCCACCTGATCAA 17222 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||| | |||| || |||||||| | || || | ||||| | | ||||||||| Sbjct 17221 CAAAGATTGATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACTTTATCTGATTACAAC 17162 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || ||||| ||||| || || ||| |||| || ||| || |||| || Sbjct 17161 ATCCAAAAGGAATCAACCTTACACTTGGTCTTGAGATTGAGAGGTGG 17115 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || ||||||||||| ||||| ||||| ||||| | ||| || || Sbjct 17569 ATGCAAATTTTCGTCAAAACTTTGACCGGTAAAACAATTACTTTAGAAGTTGAATCTTCT 17510 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || ||| ||| | | || ||| || || || |||||||| | || |||||| Sbjct 17509 GACACTATCGACAATGTCAAATCCAAAATCCAAGATAAAGAAGGTATTCCACCTGATCAA 17450 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||| | |||| || |||||||| | || || | ||||| | | ||||||||| Sbjct 17449 CAAAGATTGATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACTTTATCTGATTACAAC 17390 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || ||||| ||||| || || ||| |||| || ||| || |||| || Sbjct 17389 ATCCAAAAGGAATCAACCTTACACTTGGTTTTGAGATTGAGAGGTGG 17343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412839028899923