Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq100 141 7e-29 seq93 113 4e-20 >seq100 Length=74788 Score = 141 bits (156), Expect = 7e-29 Identities = 172/233 (74%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 107551 TTAAA-ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG 107609 ||||| ||||||||||| ||||| || ||||| || ||||| |||||| | ||| || Sbjct 22647 TTAAAGATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACTATTACCTTGGAAGTCGAA 22588 Query 107610 GCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTG 107669 | ||| || ||| | | || ||| |||||| ||||||||||| | || Sbjct 22587 TCCTCCGACACCATCGACAATGTCAAATCTAAGATTCAAGATAAAGAAGGTATTCCACCT 22528 Query 107670 GATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGAC 107729 ||||| || ||| | || | ||| |||||||| |||| |||| | ||| || | ||| Sbjct 22527 GATCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGACGGTAGAACTTTGTCCGAC 22468 Query 107730 TACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||||| |||||||| ||||| |||||| |||| ||||||||| |||| || Sbjct 22467 TACAACATCCAAAAGGAATCTACCTTGCACTTGGTCTTGAGATTGAGAGGTGG 22415 >seq93 Length=17569 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| ||||||||||| || || ||||| ||||| | ||| || || Sbjct 17341 ATGCAAATTTTCGTCAAAACTTTGACCGGTAAAACAATTACTTTAGAAGTTGAATCTTCT 17282 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| ||| | | || ||| || || ||||||||||| | || ||||| Sbjct 17281 GACACTATCGACAATGTCAAATCCAAAATCCAAGATAAAGAAGGTATTCCACCTGATCAA 17222 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | |||| || |||||||| | || |||| | ||| | | || |||||| Sbjct 17221 CAAAGATTGATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACTTTATCTGATTACAAC 17162 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || |||||||| || || || ||| |||| ||||||||| |||| || Sbjct 17161 ATCCAAAAGGAATCAACCTTACACTTGGTCTTGAGATTGAGAGGTGG 17115 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| ||||||||||| || || ||||| ||||| | ||| || || Sbjct 17569 ATGCAAATTTTCGTCAAAACTTTGACCGGTAAAACAATTACTTTAGAAGTTGAATCTTCT 17510 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| ||| | | || ||| || || ||||||||||| | || ||||| Sbjct 17509 GACACTATCGACAATGTCAAATCCAAAATCCAAGATAAAGAAGGTATTCCACCTGATCAA 17450 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | |||| || |||||||| | || |||| | ||| | | || |||||| Sbjct 17449 CAAAGATTGATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACTTTATCTGATTACAAC 17390 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || |||||||| || || || ||| |||| ||||||||| |||| || Sbjct 17389 ATCCAAAAGGAATCAACCTTACACTTGGTTTTGAGATTGAGAGGTGG 17343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398874315870079