Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq93 163 4e-35 seq100 134 2e-26 >seq93 Length=17569 Score = 163 bits (180), Expect = 4e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | ||||| || || || |||||||||||| | || || ||| | | Sbjct 17568 TGCAAATTTTCGTCAAAACTTTGACCGGTAAAACAATTACTTTAGAAGTTGAATCTTCTG 17509 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| | ||||| ||| ||||| ||| ||||||||| |||||||| ||||||| Sbjct 17508 ACACTATCGACAATGTCAAATCCAAAATCCAAGATAAAGAAGGTATTCCACCTGATCAAC 17449 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | ||||| || |||||||||||||| || |||||| ||| | ||||| || | Sbjct 17448 AAAGATTGATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACTTTATCTGATTACAACA 17389 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||| ||||| || | || || || || |||| ||||| |||| Sbjct 17388 TCCAAAAGGAATCAACCTTACACTTGGTTTTGAGATTGAGAGGTGGTA 17341 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | ||||| || || || |||||||||||| | || || ||| | | Sbjct 17340 TGCAAATTTTCGTCAAAACTTTGACCGGTAAAACAATTACTTTAGAAGTTGAATCTTCTG 17281 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| | ||||| ||| ||||| ||| ||||||||| |||||||| ||||||| Sbjct 17280 ACACTATCGACAATGTCAAATCCAAAATCCAAGATAAAGAAGGTATTCCACCTGATCAAC 17221 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | ||||| || |||||||||||||| || |||||| ||| | ||||| || | Sbjct 17220 AAAGATTGATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACTTTATCTGATTACAACA 17161 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258 | ||||| ||||| || | || || || || |||| ||||| ||| Sbjct 17160 TCCAAAAGGAATCAACCTTACACTTGGTCTTGAGATTGAGAGGTGGT 17114 >seq100 Length=74788 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | || || ||||| || ||||| ||||| | || || ||| || Sbjct 22640 TGCAAATTTTCGTCAAGACCTTAACTGGTAAAACTATTACCTTGGAAGTCGAATCCTCCG 22581 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | ||||| ||| ||| || ||| ||||||||| |||||||| ||||||| Sbjct 22580 ACACCATCGACAATGTCAAATCTAAGATTCAAGATAAAGAAGGTATTCCACCTGATCAAC 22521 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | || ||||| ||||||||||| || || |||||| || | || || || | Sbjct 22520 AAAGATTGATCTTTGCTGGTAAACAATTGGAAGACGGTAGAACTTTGTCCGACTACAACA 22461 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258 | ||||| ||||| || | || || || || |||| ||||| ||| Sbjct 22460 TCCAAAAGGAATCTACCTTGCACTTGGTCTTGAGATTGAGAGGTGGT 22414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786161378362120