Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq442 122 1e-22 seq162 84.2 3e-11 >seq442 Length=162164 Score = 122 bits (134), Expect = 1e-22 Identities = 332/500 (66%), Gaps = 30/500 (6%) Strand=Plus/Minus Query 180392 ACAACaaaaaaaaTAGTTTATAAAAATATTCTTAAAGAATTATTATGGATAATGAAAGGT 180451 || || || ||| || | | ||| |||| || | |||||||||||| | || || Sbjct 130212 ACTACCAAGAAAGTATTCTCCAAAGGTATTATTCATGAATTATTATGGTTTATTGCTGGA 130153 Query 180452 TTAACAAATTCTAATTTGTTAAATGATATTGGTGTTAAAGTGTGGAATGATAATGGTTCG 180511 | ||| || |||| | |||| | | || || ||| | ||| | | |||||| || Sbjct 130152 TCAACCGATGCTAAAATATTAACCAACAAGGGAGTCAAAATATGGGAAGGTAATGGATCC 130093 Query 180512 CGTAAGTTTTTAGATTCTTGTGGATT---TCATTTTCGAAAAGAAGGTGATTTAGGACCA 180568 ||| | | |||||| | ||||| ||| ||| ||||||||||| |||||| Sbjct 130092 CGTGAATATTTAGACAAATTGGGATTAACTCACCGTCGT---GAAGGTGATTTGGGACCA 130036 Query 180569 ATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGACTGTGATACCAACTAT 180628 | |||||||| |||||||||||| || ||| |||||| | |||||| | | ||| Sbjct 130035 GTATATGGATTCCAATGGAGACATTTTGGTGCTGAATATAAAAATTGTGATGCTGATTAT 129976 Query 180629 ATCGGGCAAGGTATAGACCAATTAAGCCAAGTTATA--GAAACTATAAAAAATAATCCCG 180686 | ||||||||| || |||||| |||| |||| ||| || ||| | | ||| Sbjct 129975 ACTGGGCAAGGTTATGATCAATTA---CAAGATATAATTAAAAAATTAAAGACTAACCCA 129919 Query 180687 AATG-CCGAAGAATAATCATAGATAGTTGGAATGTATCACAATT--ACCAGATATGGCTC 180743 ||| ||||||||||||| | ||||| || | || || || |||||| Sbjct 129918 TATGATAGAAGAATAATCATGAGTGCATGGAACCCTCCAGATTTCGACAAG--ATGGCTT 129861 Query 180744 TTCCACCATGTCACTGTTTGGT-ACAATTTTATGTT----------AGAA--ATAAAATT 180790 | || |||||||| ||||| | |||||||||||| |||| |||| | Sbjct 129860 TACCTCCATGTCA-TGTTTTCTGTCAATTTTATGTTAACTTCCCAGAGAATGCTAAACCT 129802 Query 180791 TATTTAGATTGCCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCATATAAT 180850 | || || ||||||||||||||| ||| | ||||| ||||| || | |||| Sbjct 129801 AAGTTGTCATGTTTGTTGTATCAAAGATCTTGTGATATGGGATTGGGTGTTCCTTTTAAT 129742 Query 180851 ATTGCTTTCTATTCATTTTT 180870 ||||| | ||| |||| || Sbjct 129741 ATTGCCTCTTATGCATTATT 129722 >seq162 Length=11089 Score = 84.2 bits (92), Expect = 3e-11 Identities = 153/218 (70%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 172886 ATTAAGGTTGCTCAGTTGAGTGGTTACATTGCAGAACAAACTGATTATAAACATGGTGAA 172945 ||||| |||||||| || |||||| | ||| | || | |||| | ||||||||| Sbjct 1958 ATTAAAGTTGCTCAATTAGCTGGTTATGTAAGTGAAAACACCGGTTATCATCATGGTGAA 1899 Query 172946 CAAAACCTTTGTG-AAACTATAATAAAATTTGCACAGGATTTTGTAGGTACAAATAACAT 173004 | || | || ||| | || || || ||| ||||| ||||||| ||| | ||||| || Sbjct 1898 C-AATCTTTAGTGCAGACAATTATTGGATTGGCACAAAATTTTGTTGGTTCCAATAATAT 1840 Query 173005 -AACATTACTTGAA-CCAGATGGTCAGTTTGGTACTAGACTTGAAGGAGGTAAAGATTCA 173062 || ||| ||||| ||| |||| ||||||| |||| || || |||||||||| Sbjct 1839 CAATATT--TTGAAGCCAAATGGGTCCTTTGGTAGTAGAGCTGCCGGTGGTAAAGATTTC 1782 Query 173063 GCCGCATCAAGGTATATTTATACTAAACCGCATAAAAT 173100 | || | || ||||||| |||| || | || |||| Sbjct 1781 TCTGCTGCGAGATATATTTTTACTGAATTGAATGAAAT 1744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655275814399000