Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq510 340 1e-88 seq442 109 4e-19 >seq510 Length=157725 Score = 340 bits (376), Expect = 1e-88 Identities = 603/875 (69%), Gaps = 17/875 (2%) Strand=Plus/Plus Query 43707 TGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTT 43766 ||||||||||| |||| ||||| || ||| | | || |||||||| | || || |||| Sbjct 114012 TGTTTCCAATTAAATACCATGAAATTTGGAATTTTTATAAAAAAGCTGAAGCTTCCTTTT 114071 Query 43767 GGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTAAAACCAC 43826 ||||||| |||||||||||||| | |||||| || | |||||| || |||| || Sbjct 114072 GGACAGCTGAAGAAGTTGATTTAAGTAAAGATTTGGATGATTGGAA--CAATAAATTAAC 114129 Query 43827 -----AAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGAT 43881 | |||| | | ||||| ||| |||||||| ||||||||||| || || || Sbjct 114130 TGATAATGAAAGATACTTTATTTCTAGAGTTTTGGCCTTTTTTGCTGCATCAGATGGTAT 114189 Query 43882 AGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATG 43941 ||| ||||||||||| ||| ||| | ||||||||| | |||||||| || Sbjct 114190 AGTTAATGAAAATTTAGTTGAAAATTTTTCTGCTGAAGTTCAACTGCCAGAAGCTAAATC 114249 Query 43942 TTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGAT 44001 |||||||| ||||||||| || ||||| |||||||| |||||||| | | |||| Sbjct 114250 ATTTTATGGTTTTCAAATTATGATGGAAAACATTCATTCTGAAATGTATTCTTTATTGAT 114309 Query 44002 AGATACGTACATCAAAGATGGGCACGAGAAGC--ATCGATTGTTTAATGCGATAGAAACA 44059 || || || | |||||| ||| |||||| || || |||||||| || |||| Sbjct 114310 TGAAACTTATGTTAAAGATC--CACAAGAAGCTGATTTCTTATTTAATGCCATTGAAAAT 114367 Query 44060 GTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCT 44119 | || |||| | ||||| || |||||| |||||||||| | || ||| || Sbjct 114368 ATTCCATGTATTACCAAAAAAGCTGATTGGGCCATTAAATGGATCCAAGATAAAGATGCT 114427 Query 44120 TT---TGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCG 44176 || || ||| || | || || ||||| | | | ||||| ||||||||| || || Sbjct 114428 TTATATGCTGAAAGATTGGTTGCTTTTGCTGCTATTGAAGGTATTTTCTTTAGTGGTTCA 114487 Query 44177 TTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAAT 44236 ||||| | || ||||||||||| || ||||||||||||| || ||||| || || ||| Sbjct 114488 TTTGCTTCTATCTTTTGGTTAAAAAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCCAAT 114547 Query 44237 GAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGATAT 44296 || ||||| || | |||||||| |||||| ||||||||||| || ||| | || Sbjct 114548 GAATTAATTTGTAGAGATGAAGGTTTACATACTGATTTTGCTTGTTTATTATTCTCCCAT 114607 Query 44297 CTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTAAAG 44356 | | | ||| || || | | || | | || |||| || || || | Sbjct 114608 TT---ACAAAATAGACCATCTCCAGAAATTGTTGAAAAAATCATTGTTGAAGCTGTTGAA 114664 Query 44357 ATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAATGAACTT 44416 || ||| |||||| | | || || | || || |||| |||| |||||| | Sbjct 114665 ATTGAAAAAGAATATTTTACTGATGCTCTTCCAGTTTCTTTATTAGGTATGAATTCTAAT 114724 Query 44417 TTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGCGAT 44476 || ||| |||||| ||||||| |||| ||| | ||| | || | ||||| | Sbjct 114725 TTAATGTGTCAATATGTTGAATATGTTGCTGATAGATTATTATTTGCTTTGGGTAATAAG 114784 Query 44477 AAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAA 44536 ||| |||| ||| || || |||||||| ||||||||||| || |||| || ||| Sbjct 114785 AAAGTTTATAATGTTACCAATCCATTTGATTTCATGGAAAATATCTCCTTGGCCGGTAAA 114844 Query 44537 ACAAACTTTTTTGAAAAACGCGTTGGAGAATATCA 44571 || |||||||| ||||| | ||| || ||||| Sbjct 114845 ACTAACTTTTTCGAAAAGAGAGTTTCTGATTATCA 114879 >seq442 Length=162164 Score = 109 bits (120), Expect = 4e-19 Identities = 295/448 (66%), Gaps = 29/448 (6%) Strand=Plus/Minus Query 40862 TGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGA 40921 |||||||||| | || || || |||||||| || | | |||||||||| || ||||| | Sbjct 130054 TGAAGGTGATTTGGGACCAGTATATGGATTCCAATGGAGACATTTTGGTGCTGAATATAA 129995 Query 40922 CACTATGTACT-CTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGATA 40980 | | ||| | |||||||||| |||| ||||||||||| | |||| || Sbjct 129994 AAAT-TGTGATGCTGATTATACTGGGCAAGGTTATGATCAATTACAA---GATATAATTA 129939 Query 40981 CGA--TTAAATCCGATCCC----GATAGCCGACGTATAATATTGTGCGCGTGGAACCCAA 41034 | ||||| | | ||| ||||| || ||||| || | || |||||||| Sbjct 129938 AAAAATTAAAGACTAACCCATATGATAGAAGA---ATAATCATGAGTGCATGGAACCCTC 129882 Query 41035 CGGACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGC- 41093 | || | | |||||| || || || |||||| | || ||||| ||||| ||| | Sbjct 129881 CAGATTTCGACAAGATGGCTTTACCTCCATGTCATGTTTTCTGTCAATTTTATGTTAACT 129822 Query 41094 --------AATGGTGAAC------TGTCATGTCAATTGTATCAAAGATCAGGTGACATGG 41139 |||| | ||| |||||||| |||||||||||||| |||| |||| Sbjct 129821 TCCCAGAGAATGCTAAACCTAAGTTGTCATGTTTGTTGTATCAAAGATCTTGTGATATGG 129762 Query 41140 GACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACG 41199 || | || || || ||||| || || |||||| | | || | |||||||| || | Sbjct 129761 GATTGGGTGTTCCTTTTAATATTGCCTCTTATGCATTATTAACCAAAATGATTGCTCATG 129702 Query 41200 TTACCAATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACATTA 41259 | | || | | ||| || ||| | ||||| | || |||| |||| | ||| | Sbjct 129701 TGGCTGATATGGATTGTGGGGAGTTTATCCACACTATGGGTGATGCACATGTCTACTTAG 129642 Query 41260 ATCACATAGAGCCGTTAACAGAACAACT 41287 | || | || | |||| ||||||||| Sbjct 129641 ACCATGTTGATGCATTAAAAGAACAACT 129614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397453524718555