Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq510 118 9e-22 seq93 118 9e-22 >seq510 Length=157725 Score = 118 bits (130), Expect = 9e-22 Identities = 425/654 (65%), Gaps = 17/654 (3%) Strand=Plus/Minus Query 130547 GATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAGCCATGTCGAGCATGGTTTTATTT 130606 ||||| ||||||||||| ||||| | || || |||||||| || | ||| || | | Sbjct 73907 GATTGAGATTGATCAATGAAAGCAGCTCTATCAGCAGCCATATCAATGATGTGCTTTTGT 73848 Query 130607 TTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATGTGTTTGGGTATGCGCG-CAATCGA 130665 || |||||| | |||||||| | | | | || | | || ||| | ||| | Sbjct 73847 GAGATTTCCCAAACAGTCTTGTACAAAGCTTTGATTTCATCTGGGATGTTTGGCAAACT- 73789 Query 130666 TTGAACGCTACCGTTGTTGGCTATAATTTCGTTGCGCATACTTTTATCGTACA-ATCCAA 130724 ||||| ||| ||||||| ||||| | | |||| | || | | | |||| Sbjct 73788 TTGAATAGAACCATTGTTGGAAATAATATTACTCTTCATAGCATCATTCCAGATACCCAA 73729 Query 130725 GCTGTACAAGATCTTTTACCAAATGATTATTAATGATTTGAAAATCACCAGCCAGGACGC 130784 | | || | |||||| | ||| | || | ||||| || |||||||||| ||| | Sbjct 73728 G-TCAACTAAATCTTTCAACAAGTATGGGTTGACAATTTGGAATTCACCAGCCAAGACTC 73670 Query 130785 GTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATTTGTG 130844 ||| |||||||||| ||| | ||||| || |||| ||||| || || ||||| | Sbjct 73669 TTCTGGAGTAAATGTTGGAAGTGTAAGGTTCGAAACATTCATTGTTACCCAAAATTTGAG 73610 Query 130845 CTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCGTGCGTCGTGA 130904 |||| ||| || ||||| || || || | || || | | ||| || | | | Sbjct 73609 AAGTAGATGCAGTTGGCATTGGAGCAACCAACAAGGAGTTTCTCAAACCATGTTTGGCCA 73550 Query 130905 TTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTAGGTTTGACATTGTTCCACATAT 130964 | ||| | ||||| |||||||||||||| || ||||| ||||||||| || Sbjct 73549 TGTTTTGTTTCAAAGTATCCCAATCCCATAATTCAGTTGGTTT---TCTGTTCCACAAAT 73493 Query 130965 CAAATTGTAGTATGCCTT----TACTGGCGGGACTGGATTCGAACGATTCGTAGATTCCT 131020 ||||||||| | |||| |||| | | |||| | ||| ||| || ||| Sbjct 73492 CAAATTGTAACAAACCTTGGGAAGCTGGAGAGCCTGGGT---AAC-TTTCATAAGCACCT 73437 Query 131021 TCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAATT 131080 || | ||||| || || || ||| | ||| | | ||||||||||||| |||| Sbjct 73436 TCTTCTTCAGCCAATTCAATGGAAGATTCAACAGCAGCATGATAAATGGTTTCGAAAATT 73377 Query 131081 TGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAAGGAAATTTCATTAAAATAAAAGCG 131140 || | ||||||| | | |||| | ||| | || ||| ||| | ||||| || Sbjct 73376 TGAATGTTTAATTCTCTAGCTTCTTGAGAATCGAATGGCAATCTCAATGTCATAAAGGCA 73317 Query 131141 TCTGCGAGACCCTGTA-TCCCAACGCCCACCGGTCTATGTTTTAAATTACATTT 131193 || || | ||| || | ||||| | | | ||||||||| | | ||| |||| Sbjct 73316 TCAGCTAAACCTTGAACACCCAATG-CAATTGGTCTATGTCTCATGTTAGATTT 73264 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/231 (69%), Gaps = 9/231 (4%) Strand=Plus/Minus Query 131608 TTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATC 131667 |||| | ||| | | || | ||| || |||| |||||||||| ||||||||||||||| Sbjct 72843 TTCGTTTGGAGAGAATAAGGTCCAGTCGGCGTTTTGTTCAACTCTCTTCATAAACAAATC 72784 Query 131668 CGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtttt 131727 || | |||||| || |||| |||||||||| | | |||||| |||| || Sbjct 72783 TGGGATCCATAAGGCTGGGAACAAATCTCTAGCTCTGATTTCTTCTTTACC--GTGGTTC 72726 Query 131728 tttCAAATTTAAA--AAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATT 131785 |||| ||| | || || || || || || ||||| |||||||| |||| || | Sbjct 72725 TTTCTAATATCAATGAAATCAAATATATCACTGTGCCATGGTTCCAAGTACAAGGCAAAA 72666 Query 131786 GCGCCT----TTGCGCTTACCGCCTTGATTAACATGACGAACCATGTTGTT 131832 || ||| || | ||||| ||||| | ||| | ||| | ||||||| Sbjct 72665 GCACCTGGTCTTTTG-TTACCACCTTGGTCAACGTAACGGGCAGTGTTGTT 72616 >seq93 Length=17569 Score = 118 bits (130), Expect = 9e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 || || | ||| | ||| ||||| ||||| || || || ||||| || ||||| || | | Sbjct 17115 CCACCTCTCAATCTCAAGACCAAGTGTAAGGTTGATTCCTTTTGGATGTTGTAATCAGAT 17174 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | ||| | ||||||| | |||||||| ||| |||| | | |||||||| || || Sbjct 17175 AAAGTTCTAC-CGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGG 17233 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||| |||||||| ||| ||| ||| | | || | |||||| | | |||||| Sbjct 17234 AATACCTTCTTTATCTTGGATTTTGGATTTGACATTGTCGATAGTGTCAGAAGATTCAAC 17293 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||||| ||| || | ||| || |||| |||||| || || ||||||||| Sbjct 17294 TTCTAAAGTAATTGTTTTACCGGTCAAAGTTTTGACGAAAATTTGCATA 17342 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 || || | ||| | ||| ||||| ||||| || || || ||||| || ||||| || | | Sbjct 17343 CCACCTCTCAATCTCAAAACCAAGTGTAAGGTTGATTCCTTTTGGATGTTGTAATCAGAT 17402 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | ||| | ||||||| | |||||||| ||| |||| | | |||||||| || || Sbjct 17403 AAAGTTCTAC-CGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGG 17461 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||| |||||||| ||| ||| ||| | | || | |||||| | | |||||| Sbjct 17462 AATACCTTCTTTATCTTGGATTTTGGATTTGACATTGTCGATAGTGTCAGAAGATTCAAC 17521 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| ||| || | ||| || |||| |||||| || || |||||||| Sbjct 17522 TTCTAAAGTAATTGTTTTACCGGTCAAAGTTTTGACGAAAATTTGCAT 17569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424931753588232