Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq510 210 3e-49 seq77 95.1 2e-14 >seq510 Length=157725 Score = 210 bits (232), Expect = 3e-49 Identities = 845/1315 (64%), Gaps = 23/1315 (2%) Strand=Plus/Minus Query 110668 GTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGG 110727 ||||||||| || ||||| || | | |||||| ||| ||||| | ||||| || Sbjct 73701 GTTGACAATTTGGAATTCACCAGCCAAGACTCTTCTGGAGTAAATGTTGGAAGTGTAAGG 73642 Query 110728 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 110787 ||| || |||||||| |||||||| ||||| | || || || ||||||||||| || | Sbjct 73641 TTCGAAACATTCATTGTTACCCAAAATTTGAGAAGTAGATGCAGTTGGCATTGGAGCAAC 73582 Query 110788 CAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCG-- 110845 ||| | ||| | | ||| | | ||| || || | | |||||| || Sbjct 73581 CAACAAGGAGTTTCTCAAACCATGTTTGGCCATGTTTTGTTTCAAAGTATCCCAATCCCA 73522 Query 110846 TAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGA 110905 || || || ||||||| |||| ||| ||||| || | || |||||||| || ||| Sbjct 73521 TAATTCAG-TTGGTTTTCTGTTCC-ACAAATCAAATTGTAACAAACCTTGGGAAGCTGGA 73464 Query 110906 GAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGG 110965 || || | ||||||| | ||||| |||||||||||||| | | || | Sbjct 73463 GAGCCTGGGTAACTTTCATAAGCACCTTCTTCTTCAGCCAATTCAATGGAAGATTCAACA 73404 Query 110966 GATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCA 111025 | || ||||| |||||||| || || || || | || | ||||| | ||||| Sbjct 73403 GCAGCATGATAAATGGTTTCGAAAATTTGAATGTTTAATTCTCTAGCTTCTTGAGAATCG 73344 Query 111026 AATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGT 111085 |||| | | | ||||| |||| || | ||||||||||||||| |||| ||| Sbjct 73343 AATGGCAATCTCAATGTCATAAAGGCATCAGCTAAACCTTGAACACCCAATGCAATTGGT 73284 Query 111086 CTGTGTCGCATATTAGACTTTCGCGCAGTCT-CAACGGGATAAAAATTTCTGTCAATGAC 111144 || |||| ||| ||||| ||| || ||| ||| || || | || | |||||| || Sbjct 73283 CTATGTCTCATGTTAGATTTTTCAGC-TTCTGGAACTGGGTAGTAGTTACGGTCAATAAC 73225 Query 111145 TCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA---TAATCAAA 111201 || ||| | || ||||||| || || | |||||| | ||| ||| | | | Sbjct 73224 TCTGTTCAAGTTACGAGTAACAACTTTAGTAACTTCATGTAATTTATCAAAGTTGTACCA 73165 Query 111202 AGTGCGAGTCTCTTCATT---GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAAC 111258 ||| | | || ||||| ||| | || | || || || ||||| || ||||| Sbjct 73164 AGTACTGTTTTCATCATTTTCAACAAAAGCAGGCAATGCAATAGAAGCCAAGTTACAAAC 73105 Query 111259 AGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAAT 111318 ||| ||||| | | | || || | |||||| ||| ||||| ||| || || Sbjct 73104 AGCAACTTCATCTGGAGCAGAATATTCAACAATTTCACAACACAAGTTAGAAGATTTGAT 73045 Query 111319 CGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGG 111378 ||||| ||||||||||| |||| |||| || ||||| || || | |||| | || Sbjct 73044 AACACCCAAGTTCTTTTGGTTGGTCTTGGTGTTACAAGCATCTTTATATAACATGAATGG 72985 Query 111379 CGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGC-TGGTACA 111436 || || || || || || | | | || || | ||| ||| | | | | || || Sbjct 72984 AGTACCGGTTTCAGTTTGAGCACTCAAGATGGCATACCACAACTTTTGGGCCTTGATAGT 72925 Query 111437 ATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCC 111496 || | | | || || ||||| || || || | |||| || || ||||| Sbjct 72924 TTGTC--TACCACGGTTTTCTTTTTCGTATTTGGTATATAACTCTTCGAATTCATCACCA 72867 Query 111497 ACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCC 111556 | || || | |||||| || | || |||| |||| | | ||| | | || Sbjct 72866 TAGACATCAGACAAACCTGGAGCTTCGTTTGGAGAGAATAAGGTCCAGTCGGCGTTTTGT 72807 Query 111557 TCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACCG 111615 ||||| | |||||| || | ||||| ||||| | || || || | ||||||| | | | Sbjct 72806 TCAACTCTCTTCATAAACAAATCTGGGATCCATAAGGCTGGGAACAAATCTCTAGCTCTG 72747 Query 111616 AGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCA 111675 | ||||| | ||| ||||| || | |||| ||| || | ||||| |||||| Sbjct 72746 A-TTTCTTCTTTACCGTGGTTCTTTCTAATATCAATGAAATCAAATATATCACTGTGCCA 72688 Query 111676 TGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGC 111731 ||| || | || | || | || || |||| | ||| |||| | || || | Sbjct 72687 TGGTTCCAAGTACAAGGCAAAAGCACCTGGTCTTTTG-TTACCACCTTGGTCAACGTAAC 72629 Query 111732 GCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCC 111791 | || ||| |||||| || | | ||| ||||| ||||||| ||| |||||| || | Sbjct 72628 GGGCAGTGTTGTTAAAAACTCTGACCATAGGAATGATACCATTGGATGTACCATTAGTAC 72569 Query 111792 CCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCC 111851 | ||| | | | | | | | || ||||||| |||||||| ||||| | Sbjct 72568 CAGCAATGTATGCACCAGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCAC 72509 Query 111852 ACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCT 111911 ||| || ||| ||||| | | ||| | || ||||| | || || || |||| Sbjct 72508 TCTTGGAAATTAAAGCACATGATTTCAAAGTATCGTAAATACCTTCAATAGAATCGTCCT 72449 Query 111912 TGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAA 111966 | | || | | ||| || |||||| || |||||||| ||||| || ||||| Sbjct 72448 TCATAGCAAGCAAGAAACATGAGGACATTTGTGGTCTTGGGGTACCTGCGTTGAA 72394 >seq77 Length=58201 Score = 95.1 bits (104), Expect = 2e-14 Identities = 120/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 164604 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 164663 |||||| | ||||| ||||| || || | || || || ||||||||| |||||| Sbjct 14005 TATGGTAGAGTTGCTCCACGTTCAGGATTGGCAGTTAAACATGGTATTTCTACTGGTGCT 13946 Query 164664 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 164723 |||||||||||| | || ||| |||||||| ||||| ||| | || ||||| | || Sbjct 13945 GGTGTTATTGATGCTGATTATCGTGGTGAAGTTAAAGTTGTTTTATTTAATCATAGTGAT 13886 Query 164724 AAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTC 164768 ||||| ||||| | || |||| ||| | || || ||| | ||| Sbjct 13885 AAAGATTTTGAAATTAAACAAGGTGATAGAATTGCTCAATTGGTC 13841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628027988445600