Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq510 241 2e-58 seq154 141 1e-28 >seq510 Length=157725 Score = 241 bits (266), Expect = 2e-58 Identities = 1045/1626 (64%), Gaps = 45/1626 (3%) Strand=Plus/Plus Query 104339 TTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 104398 ||||| || ||||| |||||||| ||||||||| || ||| | | || | ||||| Sbjct 72394 TTCAACGCAGGTACCCCAAGACCACAAATGTCCTCATGTTTCTTGCTTGCTATGAAGGAC 72453 Query 104399 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 104458 || || || | ||||| || | ||| | | ||||| ||| || ||| | ||| Sbjct 72454 GATTCTATTGAAGGTATTTACGATACTTTGAAATCATGTGCTTTAATTTCCAAGAGTGCT 72513 Query 104459 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 104518 || |||||||| ||||||| || | | | | | | | ||| || || Sbjct 72514 GGTGGTATTGGTTTGCACATTCACAACATTCGTTCTACTGGTGCATACATTGCTGGTACT 72573 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 |||||| ||| ||||||| ||||| ||| | | || |||||| ||| || || || Sbjct 72574 AATGGTACATCCAATGGTATCATTCCTATGGTCAGAGTTTTTAACAACACTGCCCGTTAC 72633 Query 104579 GTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634 || | |||| ||| | |||| || || | || | || | || |||||||| Sbjct 72634 GTTGACCAAGGTGGTAA-CAAAAGACCAGGTGCTTTTGCCTTGTACTTGGAACCATGGCA 72692 Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694 | ||||| | || ||| |||| | | ||||| ||| | || || | | | Sbjct 72693 CAGTGATATATTTGATTTCATTGATATTAGAAAGAACCACGGTAAAGAAGAAAT-CAGAG 72751 Query 104695 CC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 | | ||| | ||| | || | ||||| |||||| | || |||||||||||||| | | Sbjct 72752 CTAGAGATTTGTTCCCAGCCTTATGGATCCCAGATTTGTTTATGAAGAGAGTTGAACAAA 72811 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813 | | | ||| | | || | |||| || | || || ||| | || |||| | |||| Sbjct 72812 ACGCCGACTGGACCTTATTCTCTCCAAACGAAGCTCCAGGTTTGTCTGATGTCTATGGTG 72871 Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGC 104873 | || || |||| | || || || ||||| ||||| || | | || | | Sbjct 72872 ATGAATTCGAAGAGTTATATACCAAATACGAAAAAGAAAACCGTGGTAGACAAACTAT-C 72930 Query 104874 CAGCTGCCGATGT-GTGGAAAGCTATTCTCAAGT-CTCAAACCGAGACTGGTACACCATA 104931 || | | || |||| | || || || ||| ||||||| || || ||||| |||| Sbjct 72931 AAGGCCCAAAAGTTGTGGTATGCCAT-CTTGAGTGCTCAAACTGAAACCGGTACTCCATT 72989 Query 104932 CATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 104991 |||| | || ||||| || |||||| |||| || |||||||| |||||||| ||||| Sbjct 72990 CATGTTATATAAAGATGCTTGTAACACCAAGACCAACCAAAAGAACTTGGGTGTTATCAA 73049 Query 104992 GAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 105051 ||| || | ||| ||||| | |||| | | | |||||| ||||| || Sbjct 73050 ATCTTCTAACTTGTGTTGTGAAATTGTTGAATATTCTGCTCCAGATGAAGTTGCTGTTTG 73109 Query 105052 TAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC-ATTTGAT- 105109 |||| | || || || || | || | ||| || || ||| | | ||| | Sbjct 73110 TAACTTGGCTTCTATTGCATTGCCTGCTTTTGTTGAAAATGATGAAAACAGTACTTGGTA 73169 Query 105110 ----TATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTAT 105165 | ||| ||| | || |||||||| ||| ||| || ||| | ||||||||||| Sbjct 73170 CAACTTTGATAAATTACATGAAGTTACTAAAGTTGTTACTCGTAACTTGAACAGAGTTAT 73229 Query 105166 TGATAGAAATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAA 105224 ||| | || | ||||| ||| ||| ||| |||||||| |||||||| | |||| Sbjct 73230 TGACCGTAACTACTACCCAGTTCCAGA-AGCTGAAAAATCTAACATGAGACATAGACCAA 73288 Query 105225 TTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTG---TCGCCACGCATTT 105280 ||| | |||||||| ||| | || |||| || || | ||| | || |||| Sbjct 73289 TTGCATTGGGTGTTCAAGGTTTAGCTGATGCCTTTATGACATTGAGATTGC----CATTC 73344 Query 105281 GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCT 105340 ||||| | ||||| | ||| | || | || || || ||||| ||||| || ||| Sbjct 73345 GATTCTCAAGAAGCTAGAGAATTAAACATTCAAATTTTCGAAACCATTTATCATGCTGCT 73404 Query 105341 CTTGAGGCGAGTTCA--GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTT 105398 |||| | | || || ||||| || | || ||| | ||||||| | || | Sbjct 73405 GTTGAATC--TTCCATTGAATTGGCTGAAGAAGAAGGTGCTTATGAAAGTTACCCAGGCT 73462 Query 105399 CTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACT 105458 |||||||||| ||||| || | ||||||||| ||| |||| | ||||| || | | Sbjct 73463 CTCCAGCTTCCCAAGGTTTGTTACAATTTGATTTGT-GGAACAGAAAACCAA-CTGAATT 73520 Query 105459 A--CGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCT 105516 | || ||||| || | || || ||| | | ||| | | ||| | | Sbjct 73521 ATGGGATTGGGATACTTTGAAACAAAACATGGCCAAACATGGTTTGAGAAACTCCTTGTT 73580 Query 105517 CATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 105576 | |||||||||||||| || || || | ||||| |||||||| |||||||| || || Sbjct 73581 GGTTGCTCCAATGCCAACTGCATCTACTTCTCAAATTTTGGGTAACAATGAATGTTTCGA 73640 Query 105577 ACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA 105636 ||| ||||| | ||||| || |||||| | | || || || || |||||||| Sbjct 73641 ACCTTACACTTCCAACATTTACTCCAGAAGAGTCTTGGCTGGTGAATTCCAAATTGTCAA 73700 Query 105637 CAAGCAT-CTCG-TGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG--- 105691 | ||| || | || | || | || | ||| ||||| | | ||||||| Sbjct 73701 C--CCATACTTGTTGAAAGATTTAGTTGACTTGGGTATCTGGAATGATGCTATGAAGAGT 73758 Query 105692 GATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATT 105751 || | || || |||||| ||||||| | | | || ||| ||||||| Sbjct 73759 AATATTATTTCCAA---CAATGGTTCTATTCAAAGTTTGCCAAACATCCCAGATGAAATC 73815 Query 105752 AAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCA 105811 || |||||| || |||||||||||| ||| | ||||||| ||||| || Sbjct 73816 AAAGCTTTGTACAAGACTGTTTGGGAAATCTCACAAAAGCACATCATTGATATGGCTGCT 73875 Query 105812 GATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACG 105871 ||| | | | |||||||||||| |||| | ||||| | ||| || ||||| Sbjct 73876 GATAGAGCTGCTTTCATTGATCAATCTCAATCTTTGAATATTCACATTAAAGAACCAACT 73935 Query 105872 ATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATG 105931 ||| || | | ||||||| | ||| |||||||||| ||| | || || || ||| Sbjct 73936 ATGGGTAAATTGACAAGTATGCACTTTTACGGTTGGAAGAAAGGTTTGAAGACTGGTATG 73995 Query 105932 TATTAC 105937 || ||| Sbjct 73996 TACTAC 74001 >seq154 Length=15437 Score = 141 bits (156), Expect = 1e-28 Identities = 366/548 (67%), Gaps = 25/548 (5%) Strand=Plus/Minus Query 104906 TCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAAC-CAAAAGAG 104964 || ||||| || ||||| ||||| |||||||| ||||| || |||||| ||||| | Sbjct 12003 TCACAAACAGAAACTGGAGGTCCATATATGCTTTATAAAGATGCATGTAACACAAAATCG 11944 Query 104965 TAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATT 105024 || ||||||||||| || ||||| |||||| | ||| ||||| | |||| Sbjct 11943 -AACCAAAAGAATTTAGGCACCATCAAATCATCCAATTTATGTTGTGAAATTATTGAATA 11885 Query 105025 TACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGT 105084 | | ||| || || ||||| |||||||| | |||| | || | || | |||| | Sbjct 11884 TTCTTCACCAGAAGAAACAGCTGTATGTAACCTTGGATCACTTGCATTACCAATGTATTT 11825 Query 105085 GGATCCA-GAGACAAAGA--------CATTTGATTATGAAAAACTCCACGAAGTTACGAA 105135 | | || | || |||| |||||||| ||| ||| | || ||| | || Sbjct 11824 GAAAACAGGTGATGAAGAAGTGATTGAATTTGATTTTGAGAAATTACATTCTGTTGCCAA 11765 Query 105136 AACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGC 105195 | || ||||| | |||| |||||||||| || | ||||| ||| | || || Sbjct 11764 GGTGTTGACTAAAAATTTGAACAAAGTTATTGATGTAACAATGTACCCAGTTAAAACAGC 11705 Query 105196 TCGTAAA-TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATG 105254 || ||| || |||| |||| |||||||||| | | |||||||| || | || ||| Sbjct 11704 -CGAAAAGTCAAATAAACGACATCGTCCAATTGCTTTGGGTGTTCAAGGATTGGCTGATT 11646 Query 105255 TATTCATT---CTTTG-TCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCG 105310 |||| | ||| | | || ||||||| || || | ||| ||| || | ||| Sbjct 11645 TATTTGCTGAGCTTAGATTGC----CATTTGAATCTGAAGCAGCTAAGAAACTAAATATT 11590 Query 105311 CGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGC--GAGTTCAGAGTTGGCAGAGG 105368 | |||||||| || || ||||| || || ||||| || |||| || | | Sbjct 11589 CAAATATTTGAAACTATCTATCATGCAGCACTTGAAGCCTCAGTT--GAACTATCTATTC 11532 Query 105369 TTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTG 105428 |||||||| |||||||| ||| | || ||||| || || |||| | | ||||||| Sbjct 11531 AAGATGGTCCTTATGAAACTTTTCAAGGATCTCCTGCATCTGAAGGTATTTTACAATTTG 11472 Query 105429 ATATGTGG 105436 |||||||| Sbjct 11471 ATATGTGG 11464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257074421640