Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq93 102 2e-16 seq100 98.7 2e-15 >seq93 Length=17569 Score = 102 bits (112), Expect = 2e-16 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | ||| | || || || ||||||||||| ||||| | | || || || Sbjct 17126 TCTCAAGACCAAGTGTAAGGTTGATTCCTTTTGGATGTTGTAATCAGATAAAGTTCTACC 17185 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||| | || || || ||||| || | | |||||| ||||| |||| ||||| || Sbjct 17186 GTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGGAATACCTTCTTT 17245 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || ||||| || ||| || || ||||| |||||||| |||||| || | ||| || Sbjct 17246 ATCTTGGATTTTGGATTTGACATTGTCGATAGTGTCAGAAGATTCAACTTCTAAAGTAAT 17305 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || | ||| || || || | ||||| Sbjct 17306 TGTTTTACCGGTCAAAGTTTTGACGAAAATTTGCAT 17341 Score = 98.7 bits (108), Expect = 2e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || || ||||||||||| ||||| | | || || || ||||| | || || || Sbjct 17373 GTTGATTCCTTTTGGATGTTGTAATCAGATAAAGTTCTACCGTCTTCTAATTGTTTACCA 17432 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 ||||| || | | |||||| ||||| |||| ||||| || || ||||| || ||| Sbjct 17433 GCGAAAATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTATCTTGGATTTTGGATTTG 17492 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || || ||||| |||||||| |||||| || | ||| || || || || || | ||| Sbjct 17493 ACATTGTCGATAGTGTCAGAAGATTCAACTTCTAAAGTAATTGTTTTACCGGTCAAAGTT 17552 Query 211098 TTTACAAACACCTGCAT 211114 || || || | ||||| Sbjct 17553 TTGACGAAAATTTGCAT 17569 >seq100 Length=74788 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | ||| | || || || ||||||||||| || || | | || || || Sbjct 22426 TCTCAAGACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACC 22485 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||||| || || || || ||||| | | |||||| ||||| |||| ||||| || Sbjct 22486 GTCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCTTT 22545 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || || ||||| ||| || || ||||||||||| ||| ||| || || | || || Sbjct 22546 ATCTTGAATCTTAGATTTGACATTGTCGATGGTGTCGGAGGATTCGACTTCCAAGGTAAT 22605 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || || || | ||||| || || | ||||| || Sbjct 22606 AGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATCTT 22644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159144410814515