Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq510 390 1e-103 >seq510 Length=157725 Score = 390 bits (432), Expect = 1e-103 Identities = 631/899 (70%), Gaps = 10/899 (1%) Strand=Plus/Minus Query 4238 CTTTGAACA-AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTT 4296 |||| ||| ||||||| |||||| || || || |||| ||||||||| || ||||||| Sbjct 114902 CTTTAGACATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCGAAAAAGTTAGTTT 114843 Query 4297 TGCCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTT 4356 | || | || || ||||||||||| |||||||| ||||| || | || ||| ||| | Sbjct 114842 TACCGGCCAAGGAGATATTTTCCATGAAATCAAATGGATTGGTAACATTATAAACTTTCT 114783 Query 4357 CACACTTTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTT 4416 | | ||| | | |||| ||||| ||| |||| | ||| || | ||| | | Sbjct 114782 TATTACCCAAAGCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATTAAAT 114723 Query 4417 CGCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAG 4476 | || || || | ||| || || || || | || ||| | |||| ||| || Sbjct 114722 TAGAATTCATACCTAATAAAGAAACTGGAAGAGCATCAGTAAAATATTCTTTTTCAATTT 114663 Query 4477 TTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATC 4536 || ||||| || || | || | | ||| ||||||| ||||| ||| | Sbjct 114662 CAACAGCTTCAACAATGATTTTTTCAACAATTTCTGGAGATGGTCTATTTTGTAAATGGG 114603 Query 4537 CAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAG 4596 || |||||||| ||||||||| ||| |||||||| ||||| | ||| | ||| || | Sbjct 114602 AGAATAATAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTCATTGG 114543 Query 4597 AAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACC 4656 | || || || || ||||| |||||||||||||| | |||||| |||| |||||||| | Sbjct 114542 AGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTTAACCAAAAGATAGAAGCAAATGAAC 114483 Query 4657 CAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGG-ACCCGAACGAGCTG 4715 || |||||| || ||||| | || ||||| || || |||| | | | ||| Sbjct 114482 CACTAAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGCAT 114423 Query 4716 GCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTG 4775 |||| |||| |||||||| | ||||| | ||||||||| ||| || ||||| | Sbjct 114422 -CTTTATCTTGGATCCATTTAATGGCCCAATCAGCTTTTTTGGTAATACATGGAATATTT 114364 Query 4776 TATATAGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGT 4835 | || || |||||||| | ||| ||| |||| || |||||| || || | | Sbjct 114363 TCAATGGCATTAAATAAGAAATCAGCTTCTTGTGGATCTTTAACATAAGTTTCAATCAAT 114304 Query 4836 AGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTA 4895 | ||||||||||||||| || ||||| || ||| ||||| || ||||| || || Sbjct 114303 AAAGAATACATTTCAGAATGAATGTTTTCCATCATAATTTGAAAACCATAAAATGATTTA 114244 Query 4896 GCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCG 4955 ||||||| | ||||||||| | |||| |||| ||||| ||||| || |||||||| Sbjct 114243 GCTTCTGGCAGTTGAACTTCAGCAGAAAAATTTTCAACTAAATTTTCATTAACTATACCA 114184 Query 4956 TCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTA-CTGT--TCGTCAGGCTTA 5012 || || |||||||| |||||||| ||| |||||||| || | | |||| ||| Sbjct 114183 TCTGATGCAGCAAAAAAGGCCAAAACTCTAGAAATAAAGTATCTTTCATTATCAG--TTA 114126 Query 5013 AGT--TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACG 5070 | | || ||||| | |||||||||| ||||||||||||||||| | |||||||| | Sbjct 114125 ATTTATTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCAGCTGTCCAAAAGG 114066 Query 5071 ACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACA 5129 | ||||| |||||||| || | | |||||| ||| | || | ||| |||| || ||| Sbjct 114065 AAGCTTCAGCTTTTTTATAAAAATTCCAAATTTCATGGTATTTAATTGGAAACATAACA 114007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427046940415163