Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sojae_20[genbank_20GCA_5F001442715.1_202015-11-12] 511 sequences; 11,747,307 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq93 147 5e-30 seq100 136 8e-27 seq477 91.5 3e-13 seq162 87.8 4e-12 >seq93 Length=17569 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||||| || ||| |||||||||||||| |||| | || | || || ||| Sbjct 17133 ACCAAGTGTAAGGTTGATTCCTTTTGGATGTTGTAATCAGATAAAGTTCTACCGTCTTCT 17192 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | |||||| || || || ||||| | |||||| ||| |||||||| || || |||||| Sbjct 17193 AATTGTTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTATCTTGG 17252 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 || || | ||| || | ||||||||||| |||| ||| ||||| | ||| || || ||| Sbjct 17253 ATTTTGGATTTGACATTGTCGATAGTGTCAGAAGATTCAACTTCTAAAGTAATTGTTTTA 17312 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| || ||||| || ||||| Sbjct 17313 CCGGTCAAAGTTTTGACGAAAATTTGCAT 17341 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||||| || ||| |||||||||||||| |||| | || | || || ||| Sbjct 17361 ACCAAGTGTAAGGTTGATTCCTTTTGGATGTTGTAATCAGATAAAGTTCTACCGTCTTCT 17420 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | |||||| || || || ||||| | |||||| ||| |||||||| || || |||||| Sbjct 17421 AATTGTTTACCAGCGAAAATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTATCTTGG 17480 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 || || | ||| || | ||||||||||| |||| ||| ||||| | ||| || || ||| Sbjct 17481 ATTTTGGATTTGACATTGTCGATAGTGTCAGAAGATTCAACTTCTAAAGTAATTGTTTTA 17540 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| || ||||| || ||||| Sbjct 17541 CCGGTCAAAGTTTTGACGAAAATTTGCAT 17569 >seq100 Length=74788 Score = 136 bits (150), Expect = 8e-27 Identities = 147/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||| | | || | || || || | |||||| || ||||| Sbjct 22450 TTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCGTCTTCCAATTGTTTACCAGCAAA 22509 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | |||||| ||| |||||||| || || ||||| ||||| | ||| || | Sbjct 22510 GATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTATCTTGAATCTTAGATTTGACATT 22569 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||| ||||| || | ||||||||| | || || || ||||| || || ||||| || Sbjct 22570 GTCGATGGTGTCGGAGGATTCGACTTCCAAGGTAATAGTTTTACCAGTTAAGGTCTTGAC 22629 Query 283088 GAATATCTGCATTTT 283102 ||| || ||||| || Sbjct 22630 GAAAATTTGCATCTT 22644 >seq477 Length=65555 Score = 91.5 bits (100), Expect = 3e-13 Identities = 121/167 (72%), Gaps = 6/167 (4%) Strand=Plus/Minus Query 317026 GTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCA 317085 || ||||| ||||| | |||||||| |||| || ||||||| || || || |||||| Sbjct 24843 GTTGGGAAACCTTCAACTTGACCGTTAGCAATAGCTCTCATCAAAGTAGATTTACCAGCA 24784 Query 317086 CCATTGGGGCCGCAAAGACCATA---CCGATTTCCCTTCTTCAGATTAAAACGGGTGTTG 317142 ||||| || || || | ||| || | |||| |||| | | || |||| ||| Sbjct 24783 CCATTTGGACCACACAAACCGTATCTTCTGTTTC---TCTTTAATCTGAATTGGGTCTTG 24727 Query 317143 TTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACA 317189 |||| | |||||| ||||||| |||| |||||||||||| | ||| Sbjct 24726 TTCAACAAGATCTTAGCACCATAAGCCAAAGAGAACTCACAGTTACA 24680 >seq162 Length=11089 Score = 87.8 bits (96), Expect = 4e-12 Identities = 152/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 273520 AACCTTTGTACCACGGCTTCATGGCTACCATAGGTTCACCCTTCATCAGTCGCTCCACAT 273579 ||||||| ||||| || |||| || | |||||| ||||| ||||| | | || Sbjct 1499 AACCTTTATACCATGGTGTCATTTCTTGTAACTCTTCACCATTCATAAGTCGTTTAATAT 1558 Query 273580 TACCAATAATATCTTTAGGGTTGTAACTCGGAACGTTCGTAGACCAACCGGTGCCAATAC 273639 | ||| || |||||| || || ||| || | || ||||||||||| || ||||||| Sbjct 1559 TTGCAACAAGATCTTTTGGATTATAAGATGGGATATTGGTAGACCAACCAGTACCAATAC 1618 Query 273640 CGGAAGAACCATTCACCAGAATACTCGGGATAATTGGGACATAATATTCGGGCTCAATTT 273699 | | |||||| |||| ||| | || | || ||||| ||| |||| ||||||| | Sbjct 1619 CTTCCGCACCATTAACCAAAATCATTGGTAAAACTGGGAGATACCATTCTGGCTCAACTG 1678 Query 273700 TATCACCATCGTCGTAAAGGTACTTCAACAAAGCATCATCC 273740 | | ||||||| | || || | | || | ||||||| Sbjct 1679 TTTGTTCATCGTCTTGAACATAAGTATATAATGGATCATCC 1719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046732346802194