Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq5 224 1e-53
>seq5
Length=831479
Score = 224 bits (248), Expect = 1e-53
Identities = 586/884 (66%), Gaps = 11/884 (1%)
Strand=Plus/Minus
Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733
||||||||||| || | ||||| || ||||| || || || ||| ||| || || |
Sbjct 305282 TTTGGTAATCGGAGACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTTT 305223
Query 16734 CCATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793
||||||||||||||||||| || | || | || | || || | | |
Sbjct 305222 CCATGAAATCAAAAGGATTTGTGACGTTGTATCTCTTGTCACAACCAAGAGAAACAAGAA 305163
Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTA-TAAGA 16852
||| || || |||||||| | |||||| ||||| || || |||||| || | ||||
Sbjct 305162 GTCTGTCGGCAACAAATTCGACATATTGACACATCAAATCTTTGTTCATACCAAGTAAGT 305103
Query 16853 CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912
| | |||||||| || || ||| ||| ||| || || |||| ||||| | || ||
Sbjct 305102 TGG-CTGGAAGAGCGTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTTCGATGAT- 305045
Query 16913 CTAGCAACTCGTTCCTCGGAC--GGTGTATGTTTAAGATGTTTAAACATCAGACATGCGA 16970
|| | | | || || | | | || |||| || | ||| || | | ||| || |
Sbjct 305044 CTTG-AGCACGATCTTGGAATCTGGGGTATTGTTCAAATGGGAGAATAATAAACAAGCAA 304986
Query 16971 AATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCA 17030
||||| ||||| || || ||||||| || | |||||| ||||||||||| || ||||
Sbjct 304985 AATCGGTGTGTAAACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAACCTGGCA 304926
Query 17031 TCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCT 17090
|| |||| ||| || ||||| || || | || ||||| || || || || ||||| |
Sbjct 304925 TCAAACCTCTTTTTTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAGATACCTT 304866
Query 17091 CGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATT 17150
| || | ||||| || | ||||| ||| || | || | || | | ||||||
Sbjct 304865 CAACAGCGGCAAAGGCAACTAATCTTTCACCGAATAATGCATTTTCATCGCACATCCATC 304806
Query 17151 TCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATT 17210
|| |||| ||||| |||| || || || || |||| ||||| || |||||
Sbjct 304805 TCATGGCCCAGTCGGCCTTTTCTTTAATACATGGAATGTTTTCAATGGCATTGAATAAGA 304746
Query 17211 TCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGT 17270
|| ||||| | | || | | ||| || || || | || | ||| |||| || |
Sbjct 304745 ATTCCGATTCCTTTGGATCCTTGACATAGGTGTCAATCAATAAGGAGTATGTTTCCGAAT 304686
Query 17271 GTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTT 17330
| ||||| ||||| || || || || || || || |||||| | ||||| || |
Sbjct 304685 GGATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCAGGGATTTGCACCT 304626
Query 17331 CCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACG 17390
| | |||| ||| | | ||||||||| || || || || || || ||||| |
Sbjct 304625 CAGCCGAGAAGTTTTCAACCAAATTTTCGTTGACAATACCATCTGAAGCAGCAAAAAAGG 304566
Query 17391 CCAATA-TATGCTTAATGAAATATTTTTCGTCCGGTGTAAG---AACGCGCCAGTCCTTT 17446
|||| | | || |||||||| || |||||| | || | |||||| | |
Sbjct 304565 CCAACACTCTG-GTAATGAAAAATCTTTCGTTATCATTTAGTCTGTTGTTCCAGTCGTGT 304507
Query 17447 AAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATAC 17506
|| || || || | || | |||||||| |||||| ||| || | |||||||| |||
Sbjct 304506 AAGTCCTTAGACAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGGCCTTTTTGTAC 304447
Query 17507 ATATTCCAAATATCATTGTATTGTATGGGGAATACAACATATCT 17550
|| | ||| || |||| ||||| || ||||| | ||| ||||
Sbjct 304446 ATTTGCCAGATTTCATGGTATTTGATTGGGAAGAGCACAAATCT 304403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545360635160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |