Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq5 224 1e-53 >seq5 Length=831479 Score = 224 bits (248), Expect = 1e-53 Identities = 586/884 (66%), Gaps = 11/884 (1%) Strand=Plus/Minus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 ||||||||||| || | ||||| || ||||| || || || ||| ||| || || | Sbjct 305282 TTTGGTAATCGGAGACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTTT 305223 Query 16734 CCATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793 ||||||||||||||||||| || | || | || | || || | | | Sbjct 305222 CCATGAAATCAAAAGGATTTGTGACGTTGTATCTCTTGTCACAACCAAGAGAAACAAGAA 305163 Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTA-TAAGA 16852 ||| || || |||||||| | |||||| ||||| || || |||||| || | |||| Sbjct 305162 GTCTGTCGGCAACAAATTCGACATATTGACACATCAAATCTTTGTTCATACCAAGTAAGT 305103 Query 16853 CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912 | | |||||||| || || ||| ||| ||| || || |||| ||||| | || || Sbjct 305102 TGG-CTGGAAGAGCGTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTTCGATGAT- 305045 Query 16913 CTAGCAACTCGTTCCTCGGAC--GGTGTATGTTTAAGATGTTTAAACATCAGACATGCGA 16970 || | | | || || | | | || |||| || | ||| || | | ||| || | Sbjct 305044 CTTG-AGCACGATCTTGGAATCTGGGGTATTGTTCAAATGGGAGAATAATAAACAAGCAA 304986 Query 16971 AATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCA 17030 ||||| ||||| || || ||||||| || | |||||| ||||||||||| || |||| Sbjct 304985 AATCGGTGTGTAAACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAACCTGGCA 304926 Query 17031 TCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCT 17090 || |||| ||| || ||||| || || | || ||||| || || || || ||||| | Sbjct 304925 TCAAACCTCTTTTTTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAGATACCTT 304866 Query 17091 CGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATT 17150 | || | ||||| || | ||||| ||| || | || | || | | |||||| Sbjct 304865 CAACAGCGGCAAAGGCAACTAATCTTTCACCGAATAATGCATTTTCATCGCACATCCATC 304806 Query 17151 TCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATT 17210 || |||| ||||| |||| || || || || |||| ||||| || ||||| Sbjct 304805 TCATGGCCCAGTCGGCCTTTTCTTTAATACATGGAATGTTTTCAATGGCATTGAATAAGA 304746 Query 17211 TCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGT 17270 || ||||| | | || | | ||| || || || | || | ||| |||| || | Sbjct 304745 ATTCCGATTCCTTTGGATCCTTGACATAGGTGTCAATCAATAAGGAGTATGTTTCCGAAT 304686 Query 17271 GTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTT 17330 | ||||| ||||| || || || || || || || |||||| | ||||| || | Sbjct 304685 GGATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCAGGGATTTGCACCT 304626 Query 17331 CCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACG 17390 | | |||| ||| | | ||||||||| || || || || || || ||||| | Sbjct 304625 CAGCCGAGAAGTTTTCAACCAAATTTTCGTTGACAATACCATCTGAAGCAGCAAAAAAGG 304566 Query 17391 CCAATA-TATGCTTAATGAAATATTTTTCGTCCGGTGTAAG---AACGCGCCAGTCCTTT 17446 |||| | | || |||||||| || |||||| | || | |||||| | | Sbjct 304565 CCAACACTCTG-GTAATGAAAAATCTTTCGTTATCATTTAGTCTGTTGTTCCAGTCGTGT 304507 Query 17447 AAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATAC 17506 || || || || | || | |||||||| |||||| ||| || | |||||||| ||| Sbjct 304506 AAGTCCTTAGACAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGGCCTTTTTGTAC 304447 Query 17507 ATATTCCAAATATCATTGTATTGTATGGGGAATACAACATATCT 17550 || | ||| || |||| ||||| || ||||| | ||| |||| Sbjct 304446 ATTTGCCAGATTTCATGGTATTTGATTGGGAAGAGCACAAATCT 304403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545360635160