Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq5 250 3e-61
>seq5
Length=831479
Score = 250 bits (276), Expect = 3e-61
Identities = 586/872 (67%), Gaps = 12/872 (1%)
Strand=Plus/Minus
Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971
|||||||||| || | ||||| |||||||| || || || ||||||| || ||||
Sbjct 305282 TTTGGTAATCGGAGACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTTT 305223
Query 15972 CCATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAGTTCCGTAACTA 16031
|||| |||||||| ||||| || | || |||| | || || || |
Sbjct 305222 CCATGAAATCAAAAGGATTTGTGACGTTGTATCTCTTGTCACAACCAAGAGAAACAAGAA 305163
Query 16032 ATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTA-TAAGT 16090
||| || || |||||||| | |||||||||||| || || || || || | |||||
Sbjct 305162 GTCTGTCGGCAACAAATTCGACATATTGACACATCAAATCTTTGTTCATACCAAGTAAGT 305103
Query 16091 CGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATA 16150
| | |||||||| | ||| ||| || |||||| || |||| ||||||| |||||
Sbjct 305102 TGG-CTGGAAGAGCGTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTTCGATGATC 305044
Query 16151 TCGGTGGCTCG-TGTTTCAGAC-GGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGA 16208
| | || || | || | | || |||| ||| | || || | || ||| || |
Sbjct 305043 TTGA--GCACGATCTTGGAATCTGGGGTATTGTTCAAATGGGAGAATAATAAACAAGCAA 304986
Query 16209 AGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCA 16268
| ||| |||| ||||| ||||||| || | |||||||||||| || || |||||||
Sbjct 304985 AATCGGTGTGTAAACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAACCTGGCA 304926
Query 16269 TTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCT 16328
| |||| ||| || |||||||| || | |||||| || || || || || ||||| |
Sbjct 304925 TCAAACCTCTTTTTTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAGATACCTT 304866
Query 16329 CAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATT 16388
|||||| ||||| || | ||||| ||| || | |||| || || | ||||||
Sbjct 304865 CAACAGCGGCAAAGGCAACTAATCTTTCACCGAATAATGCATTTTCATCGCACATCCATC 304806
Query 16389 TCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAATT 16448
|| |||| ||||| |||| ||| ||||| || |||| ||||| || || ||
Sbjct 304805 TCATGGCCCAGTCGGCCTTTTCTTTAATACATGGAATGTTTTCAATGGCATTGAATAAGA 304746
Query 16449 TCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGT 16508
|| ||||| ||| | | ||| || ||||||| ||| ||| |||| || |
Sbjct 304745 ATTCCGATTCCTTTGGATCCTTGACATAGGTGTCAATCAATAAGGAGTATGTTTCCGAAT 304686
Query 16509 GTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTT 16568
| ||||| || || || || || |||||||| || || || | ||||| || |
Sbjct 304685 GGATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCAGGGATTTGCACCT 304626
Query 16569 CCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACG 16628
| | | || ||| ||| || || || || ||||| || ||||||||||| |
Sbjct 304625 CAGCCGAGAAGTTTTCAACCAAATTTTCGTTGACAATACCATCTGAAGCAGCAAAAAAGG 304566
Query 16629 CCAATA-TGTGCTTAATGAAATATTTTTCGTCA-GATGTA--AGAATATGCCAATCTTTT 16684
|||| | | || |||||||| || |||||| | || || | | ||| || | |
Sbjct 304565 CCAACACTCTG-GTAATGAAAAATCTTTCGTTATCATTTAGTCTGTTGTTCCAGTCGTGT 304507
Query 16685 AAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATAC 16744
|| || || || | || | |||||| | ||||| || || | |||||||| |||
Sbjct 304506 AAGTCCTTAGACAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGGCCTTTTTGTAC 304447
Query 16745 ATTTTCCAAATATCATTGTA-TTGTATGGGAA 16775
|||| ||| || |||| ||| ||| ||||||
Sbjct 304446 ATTTGCCAGATTTCATGGTATTTGATTGGGAA 304415
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511414163470840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |