Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq5 250 3e-61 >seq5 Length=831479 Score = 250 bits (276), Expect = 3e-61 Identities = 586/872 (67%), Gaps = 12/872 (1%) Strand=Plus/Minus Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971 |||||||||| || | ||||| |||||||| || || || ||||||| || |||| Sbjct 305282 TTTGGTAATCGGAGACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTTT 305223 Query 15972 CCATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAGTTCCGTAACTA 16031 |||| |||||||| ||||| || | || |||| | || || || | Sbjct 305222 CCATGAAATCAAAAGGATTTGTGACGTTGTATCTCTTGTCACAACCAAGAGAAACAAGAA 305163 Query 16032 ATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTA-TAAGT 16090 ||| || || |||||||| | |||||||||||| || || || || || | ||||| Sbjct 305162 GTCTGTCGGCAACAAATTCGACATATTGACACATCAAATCTTTGTTCATACCAAGTAAGT 305103 Query 16091 CGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATA 16150 | | |||||||| | ||| ||| || |||||| || |||| ||||||| ||||| Sbjct 305102 TGG-CTGGAAGAGCGTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTTCGATGATC 305044 Query 16151 TCGGTGGCTCG-TGTTTCAGAC-GGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGA 16208 | | || || | || | | || |||| ||| | || || | || ||| || | Sbjct 305043 TTGA--GCACGATCTTGGAATCTGGGGTATTGTTCAAATGGGAGAATAATAAACAAGCAA 304986 Query 16209 AGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCA 16268 | ||| |||| ||||| ||||||| || | |||||||||||| || || ||||||| Sbjct 304985 AATCGGTGTGTAAACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAACCTGGCA 304926 Query 16269 TTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCT 16328 | |||| ||| || |||||||| || | |||||| || || || || || ||||| | Sbjct 304925 TCAAACCTCTTTTTTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAGATACCTT 304866 Query 16329 CAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATT 16388 |||||| ||||| || | ||||| ||| || | |||| || || | |||||| Sbjct 304865 CAACAGCGGCAAAGGCAACTAATCTTTCACCGAATAATGCATTTTCATCGCACATCCATC 304806 Query 16389 TCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAATT 16448 || |||| ||||| |||| ||| ||||| || |||| ||||| || || || Sbjct 304805 TCATGGCCCAGTCGGCCTTTTCTTTAATACATGGAATGTTTTCAATGGCATTGAATAAGA 304746 Query 16449 TCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGT 16508 || ||||| ||| | | ||| || ||||||| ||| ||| |||| || | Sbjct 304745 ATTCCGATTCCTTTGGATCCTTGACATAGGTGTCAATCAATAAGGAGTATGTTTCCGAAT 304686 Query 16509 GTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTT 16568 | ||||| || || || || || |||||||| || || || | ||||| || | Sbjct 304685 GGATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCAGGGATTTGCACCT 304626 Query 16569 CCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACG 16628 | | | || ||| ||| || || || || ||||| || ||||||||||| | Sbjct 304625 CAGCCGAGAAGTTTTCAACCAAATTTTCGTTGACAATACCATCTGAAGCAGCAAAAAAGG 304566 Query 16629 CCAATA-TGTGCTTAATGAAATATTTTTCGTCA-GATGTA--AGAATATGCCAATCTTTT 16684 |||| | | || |||||||| || |||||| | || || | | ||| || | | Sbjct 304565 CCAACACTCTG-GTAATGAAAAATCTTTCGTTATCATTTAGTCTGTTGTTCCAGTCGTGT 304507 Query 16685 AAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATAC 16744 || || || || | || | |||||| | ||||| || || | |||||||| ||| Sbjct 304506 AAGTCCTTAGACAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGGCCTTTTTGTAC 304447 Query 16745 ATTTTCCAAATATCATTGTA-TTGTATGGGAA 16775 |||| ||| || |||| ||| ||| |||||| Sbjct 304446 ATTTGCCAGATTTCATGGTATTTGATTGGGAA 304415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414163470840