Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq4 104 2e-17 >seq4 Length=942658 Score = 104 bits (114), Expect = 2e-17 Identities = 419/651 (64%), Gaps = 36/651 (6%) Strand=Plus/Minus Query 101645 GGAAACGGTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAG 101704 ||||| || |||||||| || ||| ||| | ||||||| || | | |||| Sbjct 867846 GGAAATTTTCCAGGAGTTCTTTCTAATTGCTCTTTCAACGCATCAACATGGTTTGAATAG 867787 Query 101705 ATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGAC-ATGAGC 101763 | |||||||| || || ||| | ||||| || || | || || ||| || Sbjct 867786 ACATGAGCATCACCCATGACATGAACAAACTGGCCCGGTTGCATATCCACCACCATG-GC 867728 Query 101764 AATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATC 101823 |||||| |||| || | | ||| || || || || |||||||| | |||||||| Sbjct 867727 GATCATGTAAGTCAACAAGGCATAAGATGCGATATTGAACGGCACTCCCAGGCCCATATC 867668 Query 101824 AGCTGATCTTTGATACAGTTGACAGG--AAA----GCTTTCCATCACAG----------- 101866 | ||||||||||||| |||||| ||| | ||| | ||| || Sbjct 867667 ACACGATCTTTGATACATTTGACAATTCAAACGTGGTTTTTCTTCAGAGCCTTCTTTTGG 867608 Query 101867 -------ACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTT-TAGGAATGT 101918 |||||||| |||| || ||||| || || ||||| |||||| | ||| | Sbjct 867607 AAAGTTGACATAAAACTGACAAAACACATGGCATGGAGGCAAGGCCATTTCTTTGAAAG- 867549 Query 101919 CTGAAACATTCCAAGCACACATTAACATCCTTCTATCTGTAGGG-TTTGTTTTTATAGTA 101977 ||| ||||||||| | | | || || | ||| ||| || |||||||| | || Sbjct 867548 CTGGCGGGTTCCAAGCAGAAAGAATGATTCTACGATC-GTACGGATTTGTTTTAAGCGTG 867490 Query 101978 TCAATCAACTGTTTT--AATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACAC-CT 102034 | ||| | |||| | ||||||| || | ||| ||||||| || ||| || Sbjct 867489 TGAATAA--TGTTGGCCAGCTGGTCAAACCCCTTTCCAGTATAATCT-GCGTGACAATCT 867433 Query 102035 TTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCA 102094 |||||||| || || ||||| ||||| || || ||||||||||| || | ||| || | Sbjct 867432 TTATATTCGGCACCAAAATGTCTCCATTGGAAGCCATACACAGGCCCCAAATCACCCACT 867373 Query 102095 TCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATG 102154 ||||||| | | ||| || || | | || ||| |||||||| | ||||| || Sbjct 867372 TCTCTGTGGTTGAGACCCAGAGAGTCCAGATATTCTCTGGATCCATTTCCTTCCCAGATT 867313 Query 102155 TGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGT 102214 || || | | || ||| ||| ||| || || || |||||||| | ||| Sbjct 867312 CTGACTCCCTTTTCGGACAGCAGGTTGGCGTCCGTCGAACCATGTATAAACCATAGTAGT 867253 Query 102215 TCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAAT 102265 || | | || ||| || |||| || | || || || || | ||||||| Sbjct 867252 TCATGTAAAATACCCTTCAAAAACACCTTTTTTGTTGTCAATARTGGAAAT 867202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361251037098287