Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq4 104 2e-17
>seq4
Length=942658
Score = 104 bits (114), Expect = 2e-17
Identities = 419/651 (64%), Gaps = 36/651 (6%)
Strand=Plus/Minus
Query 101645 GGAAACGGTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAG 101704
||||| || |||||||| || ||| ||| | ||||||| || | | ||||
Sbjct 867846 GGAAATTTTCCAGGAGTTCTTTCTAATTGCTCTTTCAACGCATCAACATGGTTTGAATAG 867787
Query 101705 ATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGAC-ATGAGC 101763
| |||||||| || || ||| | ||||| || || | || || ||| ||
Sbjct 867786 ACATGAGCATCACCCATGACATGAACAAACTGGCCCGGTTGCATATCCACCACCATG-GC 867728
Query 101764 AATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATC 101823
|||||| |||| || | | ||| || || || || |||||||| | ||||||||
Sbjct 867727 GATCATGTAAGTCAACAAGGCATAAGATGCGATATTGAACGGCACTCCCAGGCCCATATC 867668
Query 101824 AGCTGATCTTTGATACAGTTGACAGG--AAA----GCTTTCCATCACAG----------- 101866
| ||||||||||||| |||||| ||| | ||| | ||| ||
Sbjct 867667 ACACGATCTTTGATACATTTGACAATTCAAACGTGGTTTTTCTTCAGAGCCTTCTTTTGG 867608
Query 101867 -------ACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTT-TAGGAATGT 101918
|||||||| |||| || ||||| || || ||||| |||||| | ||| |
Sbjct 867607 AAAGTTGACATAAAACTGACAAAACACATGGCATGGAGGCAAGGCCATTTCTTTGAAAG- 867549
Query 101919 CTGAAACATTCCAAGCACACATTAACATCCTTCTATCTGTAGGG-TTTGTTTTTATAGTA 101977
||| ||||||||| | | | || || | ||| ||| || |||||||| | ||
Sbjct 867548 CTGGCGGGTTCCAAGCAGAAAGAATGATTCTACGATC-GTACGGATTTGTTTTAAGCGTG 867490
Query 101978 TCAATCAACTGTTTT--AATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACAC-CT 102034
| ||| | |||| | ||||||| || | ||| ||||||| || ||| ||
Sbjct 867489 TGAATAA--TGTTGGCCAGCTGGTCAAACCCCTTTCCAGTATAATCT-GCGTGACAATCT 867433
Query 102035 TTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCA 102094
|||||||| || || ||||| ||||| || || ||||||||||| || | ||| || |
Sbjct 867432 TTATATTCGGCACCAAAATGTCTCCATTGGAAGCCATACACAGGCCCCAAATCACCCACT 867373
Query 102095 TCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATG 102154
||||||| | | ||| || || | | || ||| |||||||| | ||||| ||
Sbjct 867372 TCTCTGTGGTTGAGACCCAGAGAGTCCAGATATTCTCTGGATCCATTTCCTTCCCAGATT 867313
Query 102155 TGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGT 102214
|| || | | || ||| ||| ||| || || || |||||||| | |||
Sbjct 867312 CTGACTCCCTTTTCGGACAGCAGGTTGGCGTCCGTCGAACCATGTATAAACCATAGTAGT 867253
Query 102215 TCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAAT 102265
|| | | || ||| || |||| || | || || || || | |||||||
Sbjct 867252 TCATGTAAAATACCCTTCAAAAACACCTTTTTTGTTGTCAATARTGGAAAT 867202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361251037098287
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |