Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 1e-14 >seq2 Length=1335671 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 ||||||||||| ||| | ||||| | || || || ||||||||| ||| ||| | Sbjct 4836 AAAATGCAAATTTTCGTTAAAACCCTTACCGGTAAGACCATTACCCTTGAAGTCGAATCT 4895 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || || | | | || | |||||||| || || || |||||| | || || Sbjct 4896 TCCGACACCATTGACAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 4955 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 ||||||||| | |||||||| || || ||| ||||||| | ||| | | || ||| Sbjct 4956 CAACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCTGACTAC 5015 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || || || |||||||| || |||||| | || || |||| |||| || Sbjct 5016 AACATCCAAAAGGAATCCACCCTTCACTTAGTCTTGAGATTGAGAGGTGG 5065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428335806847235