Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq5 129 6e-25
seq2 114 1e-20
>seq5
Length=831479
Score = 129 bits (142), Expect = 6e-25
Identities = 395/609 (65%), Gaps = 9/609 (1%)
Strand=Plus/Plus
Query 116606 TTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGAGGCG 116665
|| ||| | ||||| || |||||| || || |||| ||||||||||||||||| |||
Sbjct 304406 TTTGTGCTCTTCCCAATCAAATACCATGAAATCTGGCAAATGTACAAAAAGGCCGAAGCG 304465
Query 116666 TCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGG---GAGCGC 116722
|| |||||||||| ||| || | ||| |||| |||||| ||||||| | |
Sbjct 304466 TCTTTCTGGACCGCCGAAGAAATTGACTTGTCTAAGGACTTACACGACTGGAACAACAGA 304525
Query 116723 TTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGAC 116782
| || || ||||| | |||||| | ||| |||||||||| || || ||
Sbjct 304526 CTAAATGATAACGAAAGATTTTTCATTACCAGAGTGTTGGCCTTTTTTGCTGCTTCAGAT 304585
Query 116783 GGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCG 116842
|| || |||||||| ||| |||| || ||| | |||||||| | | || ||
Sbjct 304586 GGTATTGTCAACGAAAATTTGGTTGAAAACTTCTCGGCTGAGGTGCAAATCCCTGAAGCC 304645
Query 116843 CGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACC 116902
||| ||||| || || || ||| ||||| ||| | || ||||||| || ||
Sbjct 304646 AAGTGTTTCTATGGTTTCCAAATCATGATGGAAAACATCCATTCGGAAACATACTCCTTA 304705
Query 116903 CTCATCGACACGTACGTGCGCTCTTCGGAGGA---GAAGCTCCGTTTGTTGAACGCCATC 116959
| || ||||| || || | | |||| | | || || || || |||||
Sbjct 304706 TTGATTGACACCTATGTCAAGGATCCAAAGGAATCGGAATTC---TTATTCAATGCCATT 304762
Query 116960 GAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGA 117019
|| | || || || | ||||| |||||||| ||||| || | ||||| || |
Sbjct 304763 GAAAACATTCCATGTATTAAAGAAAAGGCCGACTGGGCCATGAGATGGATGTGCGATGAA 304822
Query 117020 GAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCG 117079
| || ||||| || | | || ||||| || || || || || |||| || ||
Sbjct 304823 AATGCATTATTCGGTGAAAGATTAGTTGCCTTTGCCGCTGTTGAAGGTATCTTTTTCTCC 304882
Query 117080 GGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTC 117139
|| || || |||| || ||| | || ||| | || | ||||| || |||| ||
Sbjct 304883 GGATCGTTTGCTTCCATTTTCTGGTTGAAAAAAAGAGGTTTGATGCCAGGTTTGACATTT 304942
Query 117140 AGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTC 117199
|||||| | || | ||| || || ||| | || ||| ||||| ||||| | |||
Sbjct 304943 TCCAACGAATTAATTTGCAGAGATGAAGGTTTACACACCGATTTTGCTTGTTTATTATTC 305002
Query 117200 AAGCATTTG 117208
||||||
Sbjct 305003 TCCCATTTG 305011
Score = 86.0 bits (94), Expect = 6e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| |||||||| || || || || | || || || |||||||| | || || ||| |
Sbjct 265442 AAGATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCT 265501
Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
| || | | | | |||| ||||| |||| || | || || || || ||||| | ||
Sbjct 265502 TCTGATACCATTGACAACG-TCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCTGA 265560
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
||| ||| || | |||| ||| || || || | || |||| | ||| | ||||||
Sbjct 265561 CCAACAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGACGGTAGAACCTTATCCGACTA 265620
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||||||| ||||| |||| || || | |||||| | || || || ||
Sbjct 265621 CAACATCCAAAAGGAATCCACTCTTCACTTGGTGTTGAGATTAAGAGGTGG 265671
>seq2
Length=1335671
Score = 114 bits (126), Expect = 1e-20
Identities = 165/233 (71%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
||||||||||| ||||| ||||| || || || || ||||| ||| | || |||||| |
Sbjct 4836 AAAATGCAAATTTTCGTTAAAACCCTTACCGGTAAGACCATTACCCTTGAAGTCGAATCT 4895
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
|||||| | | | | ||||| |||| || | ||||| || || || || | |||
Sbjct 4896 TCCGACACCATTGACAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 4955
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
|| ||| || | |||| || || || || |||| |||| | ||| | ||||||
Sbjct 4956 CAACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCTGACTAC 5015
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGG 40919
|||||||| ||||| |||| || || |||| ||| | ||||| || || ||
Sbjct 5016 AACATCCAAAAGGAATCCACCCTTCACTTAGTCTTGAGATTGAGAGGTGGTGG 5068
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515218961711120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |