Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq5 143 4e-29
seq6 111 2e-19
seq4 91.5 2e-13
>seq5
Length=831479
Score = 143 bits (158), Expect = 4e-29
Identities = 171/232 (74%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| ||| | ||||| |||| || || || || ||| |||| ||||| | |
Sbjct 265445 ATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCT 265504
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| ||| || | || || || || |||||||| |||||||| |||||||| |||
Sbjct 265505 GATACCATTGACAACGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCTGACCAA 265564
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | || || || || || |||||||| || || |||| ||| || || ||
Sbjct 265565 CAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGACGGTAGAACCTTATCCGACTACAAC 265624
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTA 124770
|| ||||| ||||| ||| | || ||||| || | ||| ||||||||||||
Sbjct 265625 ATCCAAAAGGAATCCACTCTTCACTTGGTGTTGAGATTAAGAGGTGGTATTA 265676
>seq6
Length=817167
Score = 111 bits (122), Expect = 2e-19
Identities = 114/151 (75%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 124617 AAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCA 124676
|||||||| ||||| || || |||||||| |||||||| ||||| || | || |||||
Sbjct 642979 AAACAGAAGATTCAGGACAAGGAAGGTATTCCACCTGACCAACAGAGATTGATCTTTGCG 643038
Query 124677 GGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACT 124736
|| || ||||||||||| | |||| | || || || |||||||||||||| ||
Sbjct 643039 GGTAAGCAATTAGAGGACGGAAGAACGCTMTCRGAYTACAACATTCAAAAAGAATCCACA 643098
Query 124737 TTGCATTTGGTTTTACGTTTACGAGGTGGTA 124767
| |||||||| || | || |||||||||
Sbjct 643099 CTCCATTTGGTGTTGAGATTGAGAGGTGGTA 643129
>seq4
Length=942658
Score = 91.5 bits (100), Expect = 2e-13
Identities = 427/673 (63%), Gaps = 37/673 (5%)
Strand=Plus/Minus
Query 205317 TCtttttatttttaattttGGAAATGGGTTT---GGTGTACGTTCTAATTGtttttttAA 205373
||| |||||| | || || |||||| ||| || || | ||||||||| | ||| ||
Sbjct 867865 TCTCTTTATTATCAACTTAGGAAAT---TTTCCAGGAGTTCTTTCTAATTGCTCTTTCAA 867809
Query 205374 TCCATTAATATGATTAACATATATATGTGCATTACCAATATTATGAATAAATTCATATGG 205433
||| || ||| || ||| | ||| |||| ||| || ||||| ||| | ||
Sbjct 867808 CGCATCAACATGGTTTGAATAGACATGAGCATCACCCATGACATGAACAAACTGGCCCGG 867749
Query 205434 TTTTAAATTAGTTAA-ATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAA 205492
|| | || | ||| || ||||| |||||||| || |||| || | ||| |
Sbjct 867748 TTGCATATCCACCACCATG-GCGATCATGTAAGTCAACAAGGCATAAGATGCGATATTGA 867690
Query 205493 ATGGTACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATGTAAGATAT--TT 205550
| || || || | ||||||||| |||||||||||||||||||| | | | | ||
Sbjct 867689 ACGGCACTCCCAGGCCCATATCACACGATCTTTGATACATTTGACAATTCAAACGTGGTT 867630
Query 205551 ATTATTAA-------------------TTACATGAAATTGTACAAAACA-ATGACAAGGT 205590
|| || | | |||| ||| || |||||||| ||| || ||
Sbjct 867629 TTTCTTCAGAGCCTTCTTTTGGAAAGTTGACATAAAACTG-ACAAAACACATGGCATGGA 867571
Query 205591 GGTATAACCATATTTTCAACATCTATAGGATTCCAGGCTGTTAATATTATATTTCTA-GA 205649
|| | |||| | || | | || || ||||| || | | || || |||| ||
Sbjct 867570 GGCAAGGCCATTTCTTTGAAAGCTGGCGGGTTCCAAGCAGAAAGAATGAT---TCTACGA 867514
Query 205650 T--TCAGGtttattttttattttatttatAATATGTGTTAATTGATCAAATCCTTGATTT 205707
| | || || |||| | | | ||||| | | | || ||||| || |
Sbjct 867513 TCGTACGGATTTGTTTTAAGCGTGTGAATAATGTTGGCCAGCTGGTCAAACCCCTTTCCA 867454
Query 205708 GTATAATTTGTATCCATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCATAA 205767
||||||| || | ||| |||||| ||||||||||| | |||||| || |||||
Sbjct 867453 GTATAATCTGCGTGACAATCTTTATATTCGGCACCAAAATGTCTCCATTGGAAGCCATAC 867394
Query 205768 ACTGGACCTAAATCACCTTCTTTTCTATCATTAAAACCACGtttttttatatattttaat 205827
|| || || |||||||| ||| ||| | || | ||| | | | ||||| |
Sbjct 867393 ACAGGCCCCAAATCACCCACTTCTCTGTGGTTGAGACCCAGAGAGTCCAGATATTCTCTG 867334
Query 205828 gatccattttcatcccaaatatggattcctttattttttaGAATATTTGTATTAGTTGAT 205887
||||||||| | ||||| || || ||| || | || | || | | || ||
Sbjct 867333 GATCCATTTCCTTCCCAGATTCTGACTCCCTTTTCGGACAGCAGGTTGGCGTCCGTCGAA 867274
Query 205888 CCAGATATAAACCATAATAATTCTTCAACAATTCCTCTCCAAAACATTGATTTTGTTGTA 205947
||| ||||||||||| || ||| | | ||| || || |||||| |||||||||
Sbjct 867273 CCATGTATAAACCATAGTAGTTCATGTAAAATACCCTTCAAAAACACCTTTTTTGTTGTC 867214
Query 205948 AATAATGGAAATG 205960
|||| ||||||||
Sbjct 867213 AATARTGGAAATG 867201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755455650601600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |