Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq5 259 4e-64 >seq5 Length=831479 Score = 259 bits (286), Expect = 4e-64 Identities = 578/852 (68%), Gaps = 23/852 (3%) Strand=Plus/Minus Query 15959 ACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCCATAAAATCAAAA 16018 ||||||||||||||||| || || || || |||| || || |||||||| ||||||||| Sbjct 305268 ACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTTTCCATGAAATCAAAA 305209 Query 16019 GGATTTTTTGAACAATAGTAT---TTATCGCATCCCAATTCCAACAATAA-TCTATCCGC 16074 |||||| | || | |||| || || || || || ||||| || ||| || || Sbjct 305208 GGATTTGTG--ACGTT-GTATCTCTTGTCACAACC-AAGAGAAACAAGAAGTCTGTCGGC 305153 Query 16075 CACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTAACAGGGAT 16134 |||||||| | ||| || ||| ||||| |||||| || | ||| || | || | Sbjct 305152 AACAAATTCGACATATTGACACATCAAATCTTTGTTCATACCAAGTAAGTTGGCTGGAAG 305093 Query 16135 TGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATATCTCTTACTAC 16194 || ||||| ||| | ||| ||| || | ||| ||||| ||| || | | | || Sbjct 305092 AGCGTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTTCGATGATCT---TGAGCAC 305036 Query 16195 ACTATTTAA--CGGAGGGTTTAAT-AAGTGTTTAAACATTATACAAGCAAAATCACAATG 16251 | || | | | || || | || || || | || |||||||||||| || Sbjct 305035 GATCTTGGAATCTGGGGTATTGTTCAAATGGGAGAATAATAAACAAGCAAAATCGGTGTG 304976 Query 16252 CAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCG 16311 || ||||| || || | ||||| ||||| |||||||| | ||||||||| | |||| Sbjct 304975 TAAACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAACCTGGCATCAAACCTCT 304916 Query 16312 TTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGC 16371 |||||| | ||| || || | ||||| || || || || || ||||||||||| ||||| Sbjct 304915 TTTTTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAGATACCTTCAACAGCGGC 304856 Query 16372 AAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatccattttttagccca 16431 ||| ||||| |||| |||||| | | ||||| | |||||| | | ||||| Sbjct 304855 AAAGGCAACTAATCTTTCACCGAATAATGCATTTTCATCGCACATCCATCTCATGGCCCA 304796 Query 16432 atttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAAATAAtt--tttt 16489 | || |||| ||||| ||| ||||| || || ||||| ||| || |||| || Sbjct 304795 GTCGGCCTTTTCTTTAATACATGGAATGTTTTCAATGGCATTGAAT-AAGAATTCCGATT 304737 Query 16490 tCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTC 16549 ||||| ||| | ||| || || || | ||| || |||| ||||| || || Sbjct 304736 CCTTTG-GATCCTTGACATAGGTGTCAATCAATAAGGAGTATGTTTCCGAATGGATGTTT 304678 Query 16550 TCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAA 16609 ||||| || || |||||||| || || | ||||| | ||||| || |||| | Sbjct 304677 TCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCAGGGATTTGCACCTCAGCCGAG 304618 Query 16610 AACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACG-CAAGTAT 16668 || |||| | || |||||||| || || ||||| ||| |||||||| | ||| | Sbjct 304617 AAGTTTTCAACCAAATTTTCGTTGACAATACCATCTGAAGCAGCAAAAAAGGCCAACACT 304558 Query 16669 GTGTTTAATAAAAtttttttCGTTATCTGAAAGT---TTTAACCAGTCAGAAAAATCTTT 16725 || |||| ||| | |||||||||| ||| || |||||| || || || Sbjct 304557 CTG-GTAATGAAAAATCTTTCGTTATCATTTAGTCTGTTGTTCCAGTCGTGTAAGTCCTT 304499 Query 16726 TGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACATTTTCCA 16785 || || || | ||||| | ||||| ||||| || | |||||||| ||||||| ||| Sbjct 304498 AGACAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGGCCTTTTTGTACATTTGCCA 304439 Query 16786 TATGTCTTCGTA 16797 || || | ||| Sbjct 304438 GATTTCATGGTA 304427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511786088200