Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq5 259 4e-64
>seq5
Length=831479
Score = 259 bits (286), Expect = 4e-64
Identities = 578/852 (68%), Gaps = 23/852 (3%)
Strand=Plus/Minus
Query 15959 ACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCCATAAAATCAAAA 16018
||||||||||||||||| || || || || |||| || || |||||||| |||||||||
Sbjct 305268 ACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTTTCCATGAAATCAAAA 305209
Query 16019 GGATTTTTTGAACAATAGTAT---TTATCGCATCCCAATTCCAACAATAA-TCTATCCGC 16074
|||||| | || | |||| || || || || || ||||| || ||| || ||
Sbjct 305208 GGATTTGTG--ACGTT-GTATCTCTTGTCACAACC-AAGAGAAACAAGAAGTCTGTCGGC 305153
Query 16075 CACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTAACAGGGAT 16134
|||||||| | ||| || ||| ||||| |||||| || | ||| || | || |
Sbjct 305152 AACAAATTCGACATATTGACACATCAAATCTTTGTTCATACCAAGTAAGTTGGCTGGAAG 305093
Query 16135 TGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATATCTCTTACTAC 16194
|| ||||| ||| | ||| ||| || | ||| ||||| ||| || | | | ||
Sbjct 305092 AGCGTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTTCGATGATCT---TGAGCAC 305036
Query 16195 ACTATTTAA--CGGAGGGTTTAAT-AAGTGTTTAAACATTATACAAGCAAAATCACAATG 16251
| || | | | || || | || || || | || |||||||||||| ||
Sbjct 305035 GATCTTGGAATCTGGGGTATTGTTCAAATGGGAGAATAATAAACAAGCAAAATCGGTGTG 304976
Query 16252 CAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCG 16311
|| ||||| || || | ||||| ||||| |||||||| | ||||||||| | ||||
Sbjct 304975 TAAACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAACCTGGCATCAAACCTCT 304916
Query 16312 TTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGC 16371
|||||| | ||| || || | ||||| || || || || || ||||||||||| |||||
Sbjct 304915 TTTTTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAGATACCTTCAACAGCGGC 304856
Query 16372 AAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatccattttttagccca 16431
||| ||||| |||| |||||| | | ||||| | |||||| | | |||||
Sbjct 304855 AAAGGCAACTAATCTTTCACCGAATAATGCATTTTCATCGCACATCCATCTCATGGCCCA 304796
Query 16432 atttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAAATAAtt--tttt 16489
| || |||| ||||| ||| ||||| || || ||||| ||| || |||| ||
Sbjct 304795 GTCGGCCTTTTCTTTAATACATGGAATGTTTTCAATGGCATTGAAT-AAGAATTCCGATT 304737
Query 16490 tCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTC 16549
||||| ||| | ||| || || || | ||| || |||| ||||| || ||
Sbjct 304736 CCTTTG-GATCCTTGACATAGGTGTCAATCAATAAGGAGTATGTTTCCGAATGGATGTTT 304678
Query 16550 TCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAA 16609
||||| || || |||||||| || || | ||||| | ||||| || |||| |
Sbjct 304677 TCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCAGGGATTTGCACCTCAGCCGAG 304618
Query 16610 AACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACG-CAAGTAT 16668
|| |||| | || |||||||| || || ||||| ||| |||||||| | ||| |
Sbjct 304617 AAGTTTTCAACCAAATTTTCGTTGACAATACCATCTGAAGCAGCAAAAAAGGCCAACACT 304558
Query 16669 GTGTTTAATAAAAtttttttCGTTATCTGAAAGT---TTTAACCAGTCAGAAAAATCTTT 16725
|| |||| ||| | |||||||||| ||| || |||||| || || ||
Sbjct 304557 CTG-GTAATGAAAAATCTTTCGTTATCATTTAGTCTGTTGTTCCAGTCGTGTAAGTCCTT 304499
Query 16726 TGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACATTTTCCA 16785
|| || || | ||||| | ||||| ||||| || | |||||||| ||||||| |||
Sbjct 304498 AGACAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGGCCTTTTTGTACATTTGCCA 304439
Query 16786 TATGTCTTCGTA 16797
|| || | |||
Sbjct 304438 GATTTCATGGTA 304427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462511786088200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |