Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq2 104 2e-17
seq5 96.9 3e-15
seq6 82.4 6e-11
>seq2
Length=1335671
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GTT 45168
|||||||||||||| || || ||||| || ||| ||||| || ||||||||||| | |
Sbjct 5065 CCACCTCTCAATCTCAAGACTAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAT 5006
Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| | | | |||| |||| ||| || || || || || || | |||||||| || ||
Sbjct 5005 AAGGT-TCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGG 4947
Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288
| ||| |||||||| || |||||||| || | | | |||| | || ||
Sbjct 4946 AATACCTTCCTTGTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGATTCGAC 4887
Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339
|| | |||||| ||||| || || || || || || || |||||||| ||
Sbjct 4886 TTCAAGGGTAATGGTCTTACCGGTAAGGGTTTTAACGAAAATTTGCATTTT 4836
>seq5
Length=831479
Score = 96.9 bits (106), Expect = 3e-15
Identities = 164/235 (70%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GTT 45168
|||||||| ||||| || |||||||| || ||| ||||| || ||||||||||| | |
Sbjct 265671 CCACCTCTTAATCTCAACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAT 265612
Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| | | | |||| || | ||| || || ||||| ||||| | |||||||| || ||
Sbjct 265611 AAGGT-TCTACCGTCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGG 265553
Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288
| ||| ||||| || || |||||||| || | | | | || | || ||
Sbjct 265552 GATACCTTCCTTATCTTGGATCTTTTGCTTGACGTTGTCAATGGTATCAGAAGATTCAAC 265493
Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343
|| | || || ||||| || || | ||||| ||||| |||||||| ||| ||
Sbjct 265492 TTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCATCTTGACT 265438
>seq6
Length=817167
Score = 82.4 bits (90), Expect = 6e-11
Identities = 109/152 (72%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||||||| || ||||| || || ||| || || ||||||||||| ||
Sbjct 643127 CCACCTCTCAATCTCAACACCAAATGGAGTGTGGATTCTTTTTGAATGTTGTARTCYGAK 643068
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| | |||| || | ||| || || || || ||||| | ||||||||| || ||
Sbjct 643067 AGCGTTCTTCCGTCCTCTAATTGCTTACCCGCAAAGATCAATCTCTGTTGGTCAGGTGGA 643008
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAAC 45261
| ||| ||||||||| ||| || || || ||
Sbjct 643007 ATACCTTCCTTGTCCTGAATCTTCTGTTTCAC 642976
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395075021845777
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |