Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq5 289 3e-73 >seq5 Length=831479 Score = 289 bits (320), Expect = 3e-73 Identities = 594/874 (68%), Gaps = 17/874 (2%) Strand=Plus/Minus Query 13928 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13987 ||||| |||||||||||||| || ||||| | | || || |||||||| |||||||| Sbjct 305268 ACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTTTCCATGAAATCAAAA 305209 Query 13988 GGATTTGTTGACATAAACACT-TTATCACAACCTAGTTCTAATAGTAATCTATCCGCAAT 14046 |||||||| ||| | || || |||||||| || | || | ||| || |||| Sbjct 305208 GGATTTGT-GACGTTGTATCTCTTGTCACAACCAAGAGAAACAAGAAGTCTGTCGGCAAC 305150 Query 14047 GAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTAT 14106 || || | ||||||| |||| ||||| |||||||| | || || | |||| Sbjct 305149 AAATTCGACATATTGACACATCAAATCTTTGTTCATACCAAGTAAGTTGGCTGGAAGAGC 305090 Query 14107 ATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCGTAATAATTTC 14166 | || ||| || || ||| || ||||| || | || || | | || | Sbjct 305089 GTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTTCGATGATCTTGAGCACGATCT- 305031 Query 14167 ATTAGAA---GGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAG 14223 | ||| || | || || | ||| || | |||||| |||||||| || | Sbjct 305030 --TGGAATCTGGGGTATTGTTCAAATGGGAGAATAATAAACAAGCAAAATCGGTGTGTAA 304973 Query 14224 GCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttt 14283 || |||||||| | ||| | |||||| |||||||| || ||||||||||| |||| ||| Sbjct 304972 ACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAACCTGGCATCAAACCTCTTTT 304913 Query 14284 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14343 ||| ||||| || || | ||| || |||||||| || || || || ||||| || ||||| Sbjct 304912 TTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAGATACCTTCAACAGCGGCAAA 304853 Query 14344 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14403 || | ||||| ||| || || |||| |||| | | |||||| | | ||||| || Sbjct 304852 GGCAACTAATCTTTCACCGAATAATGCATTTTCATCGCACATCCATCTCATGGCCCAGTC 304793 Query 14404 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTCC--TTCTCT 14461 | |||| ||||||| | || ||||||| ||||| ||||| |||| ||| || Sbjct 304792 GGCCTTTTCTTTAATACATGGAATGTTTTCAATGGCATTGAATAAGAATTCCGATTC-CT 304734 Query 14462 TTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTC 14520 || | | ||||| | || || ||||| | |||| || |||| || || |||||||| Sbjct 304733 TTGGATCCTTGACA--TAGGTGTCAATCAATAAGGAGTATGTTTCCGAATGGATGTTTTC 304676 Query 14521 CATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAA 14580 ||| || || |||||||| ||||| | ||||| | ||| ||||| | | || Sbjct 304675 CATCATGATTTGGAAACCATAGAAACACTTGGCTTCAGGGATTTGCACCTCAGCCGAGAA 304616 Query 14581 TCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTT 14640 |||| |||||||||| || || |||||||| ||| |||||||| ||||| | | Sbjct 304615 GTTTTCAACCAAATTTTCGTTGACAATACCATCTGAAGCAGCAAAAAAGGCCAACACTCT 304556 Query 14641 TTTAATAAAGTATTGCTCTTCATTGCTGAGT---TTTTTCCAATCGGCTAAATCCTTAGA 14697 |||| || || || | || | ||| || ||||| ||| ||| |||||||| Sbjct 304555 GGTAATGAAAAATCTTTCGTTATCATTTAGTCTGTTGTTCCAGTCGTGTAAGTCCTTAGA 304496 Query 14698 AAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACATTACCCATAT 14757 | || | ||| || | ||||| ||| || | || ||||| |||||| ||| || Sbjct 304495 CAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGGCCTTTTTGTACATTTGCCAGAT 304436 Query 14758 TTCTTTATATAATATAGGAAAAACTACAAATCTT 14791 ||| | ||| || || || | ||||||||| Sbjct 304435 TTCATGGTATTTGATTGGGAAGAGCACAAATCTT 304402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345376915160