Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq5 289 3e-73
>seq5
Length=831479
Score = 289 bits (320), Expect = 3e-73
Identities = 594/874 (68%), Gaps = 17/874 (2%)
Strand=Plus/Minus
Query 13928 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13987
||||| |||||||||||||| || ||||| | | || || |||||||| ||||||||
Sbjct 305268 ACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTTTCCATGAAATCAAAA 305209
Query 13988 GGATTTGTTGACATAAACACT-TTATCACAACCTAGTTCTAATAGTAATCTATCCGCAAT 14046
|||||||| ||| | || || |||||||| || | || | ||| || ||||
Sbjct 305208 GGATTTGT-GACGTTGTATCTCTTGTCACAACCAAGAGAAACAAGAAGTCTGTCGGCAAC 305150
Query 14047 GAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTAT 14106
|| || | ||||||| |||| ||||| |||||||| | || || | ||||
Sbjct 305149 AAATTCGACATATTGACACATCAAATCTTTGTTCATACCAAGTAAGTTGGCTGGAAGAGC 305090
Query 14107 ATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCGTAATAATTTC 14166
| || ||| || || ||| || ||||| || | || || | | || |
Sbjct 305089 GTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTTCGATGATCTTGAGCACGATCT- 305031
Query 14167 ATTAGAA---GGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAG 14223
| ||| || | || || | ||| || | |||||| |||||||| || |
Sbjct 305030 --TGGAATCTGGGGTATTGTTCAAATGGGAGAATAATAAACAAGCAAAATCGGTGTGTAA 304973
Query 14224 GCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttt 14283
|| |||||||| | ||| | |||||| |||||||| || ||||||||||| |||| |||
Sbjct 304972 ACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAACCTGGCATCAAACCTCTTTT 304913
Query 14284 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14343
||| ||||| || || | ||| || |||||||| || || || || ||||| || |||||
Sbjct 304912 TTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAGATACCTTCAACAGCGGCAAA 304853
Query 14344 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14403
|| | ||||| ||| || || |||| |||| | | |||||| | | ||||| ||
Sbjct 304852 GGCAACTAATCTTTCACCGAATAATGCATTTTCATCGCACATCCATCTCATGGCCCAGTC 304793
Query 14404 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTCC--TTCTCT 14461
| |||| ||||||| | || ||||||| ||||| ||||| |||| ||| ||
Sbjct 304792 GGCCTTTTCTTTAATACATGGAATGTTTTCAATGGCATTGAATAAGAATTCCGATTC-CT 304734
Query 14462 TTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTC 14520
|| | | ||||| | || || ||||| | |||| || |||| || || ||||||||
Sbjct 304733 TTGGATCCTTGACA--TAGGTGTCAATCAATAAGGAGTATGTTTCCGAATGGATGTTTTC 304676
Query 14521 CATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAA 14580
||| || || |||||||| ||||| | ||||| | ||| ||||| | | ||
Sbjct 304675 CATCATGATTTGGAAACCATAGAAACACTTGGCTTCAGGGATTTGCACCTCAGCCGAGAA 304616
Query 14581 TCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTT 14640
|||| |||||||||| || || |||||||| ||| |||||||| ||||| | |
Sbjct 304615 GTTTTCAACCAAATTTTCGTTGACAATACCATCTGAAGCAGCAAAAAAGGCCAACACTCT 304556
Query 14641 TTTAATAAAGTATTGCTCTTCATTGCTGAGT---TTTTTCCAATCGGCTAAATCCTTAGA 14697
|||| || || || | || | ||| || ||||| ||| ||| ||||||||
Sbjct 304555 GGTAATGAAAAATCTTTCGTTATCATTTAGTCTGTTGTTCCAGTCGTGTAAGTCCTTAGA 304496
Query 14698 AAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACATTACCCATAT 14757
| || | ||| || | ||||| ||| || | || ||||| |||||| ||| ||
Sbjct 304495 CAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGGCCTTTTTGTACATTTGCCAGAT 304436
Query 14758 TTCTTTATATAATATAGGAAAAACTACAAATCTT 14791
||| | ||| || || || | |||||||||
Sbjct 304435 TTCATGGTATTTGATTGGGAAGAGCACAAATCTT 304402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482345376915160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |