Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq2 116 3e-21 seq5 109 4e-19 >seq2 Length=1335671 Score = 116 bits (128), Expect = 3e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181 |||||| || ||||| ||||| ||||||||||| | | ||| ||| ||||||||||| Sbjct 5042 GTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTACCGTCTTCCAATTG 4983 Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241 || || ||| |||| | ||||||||| || || | |||||||| || || | Sbjct 4982 CTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTT 4923 Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301 ||||||||| | ||| ||||| | ||| ||||| ||| ||| | || ||||| Sbjct 4922 TTGCTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCAAGGGTAATGGTCTTACCGGT 4863 Query 18302 CAATGTTTTTACAAAAATTTGCATTTT 18328 | ||||| || |||||||||||||| Sbjct 4862 AAGGGTTTTAACGAAAATTTGCATTTT 4836 >seq5 Length=831479 Score = 109 bits (120), Expect = 4e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || | || ||| | |||| |||||| || ||||| ||||| ||||||||||||| Sbjct 265671 CCACCTCTTAATCTCAACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAT 265612 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| ||| ||||| ||||| || || || |||| | ||||||||| || || Sbjct 265611 AAGGTTCTACCGTCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGG 265552 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||||||||| || | ||||||||| | ||| || ||| | || | Sbjct 265551 ATACCTTCCTTATCTTGGATCTTTTGCTTGACGTTGTCAATGGTATCAGAAGATTCAACT 265492 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 || | |||||| | || || || || || || |||||||||||||| || Sbjct 265491 TCTAAAGTGATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCATCTT 265442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343828939565