Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq2 116 3e-21
seq5 109 4e-19
>seq2
Length=1335671
Score = 116 bits (128), Expect = 3e-21
Identities = 150/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181
|||||| || ||||| ||||| ||||||||||| | | ||| ||| |||||||||||
Sbjct 5042 GTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTACCGTCTTCCAATTG 4983
Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241
|| || ||| |||| | ||||||||| || || | |||||||| || || |
Sbjct 4982 CTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTT 4923
Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301
||||||||| | ||| ||||| | ||| ||||| ||| ||| | || |||||
Sbjct 4922 TTGCTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCAAGGGTAATGGTCTTACCGGT 4863
Query 18302 CAATGTTTTTACAAAAATTTGCATTTT 18328
| ||||| || ||||||||||||||
Sbjct 4862 AAGGGTTTTAACGAAAATTTGCATTTT 4836
>seq5
Length=831479
Score = 109 bits (120), Expect = 4e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
|| || | || ||| | |||| |||||| || ||||| ||||| |||||||||||||
Sbjct 265671 CCACCTCTTAATCTCAACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAT 265612
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| ||| ||| ||||| ||||| || || || |||| | ||||||||| || ||
Sbjct 265611 AAGGTTCTACCGTCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGG 265552
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278
| ||||||||||| || | ||||||||| | ||| || ||| | || |
Sbjct 265551 ATACCTTCCTTATCTTGGATCTTTTGCTTGACGTTGTCAATGGTATCAGAAGATTCAACT 265492
Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
|| | |||||| | || || || || || || |||||||||||||| ||
Sbjct 265491 TCTAAAGTGATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCATCTT 265442
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343828939565
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |