Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq4 250 2e-61
seq5 188 6e-43
seq2 96.9 3e-15
seq6 93.3 4e-14
>seq4
Length=942658
Score = 250 bits (276), Expect = 2e-61
Identities = 1161/1826 (64%), Gaps = 36/1826 (2%)
Strand=Plus/Minus
Query 22154 TAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTT 22213
|||||||| || ||||||| ||| ||||||| | || ||||| ||||| |||| |||
Sbjct 334593 TAATACATACCAGTCTTCAATCCCTTCTTCCATCCATAGAAATGCATCGATGTCAGTTTA 334534
Query 22214 CCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCT 22273
|| | || | | || | || | ||| ||||| || | || |||
Sbjct 334533 CCCATGGTAGGGTTCTTTAGGTGAATGTTCATACTTTGAGATTGATCAATGTAGGCACCT 334474
Query 22274 CGATCGGCGGCCATATTTATCAATGTACGCAT-CGACATTTCCCATACGGTCTTGTACAG 22332
| ||||| ||||||| || ||| || | ||| |||||||| || |||||||| |
Sbjct 334473 CTGTCGGCAGCCATATCGAT-AATAGACTTTTGCGAGATTTCCCAAACTGTCTTGTAGAT 334415
Query 22333 TTGCCTGATCTCTAACGGTATCGATTCG-ATCCTCTGGACGGACCCGTTATTGTGTATGA 22391
| | |||| ||| || || | | | | | || | |||||||| | || |
Sbjct 334414 ATCCTTGATTTCTTGTGGAAT-GTTAGGCAAGTTTTGAATCGACCCGTTGTCAGAAATAA 334356
Query 22392 TCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGAC 22451
| || || || | ||||||||| || || || | ||| ||| | | || | |
Sbjct 334355 TGTGGTTCTTCATGGAATCGTTCCATAATCCCATATCAACCAAGTCTCTCAACATGTAAG 334296
Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGG--TAAATGTTGGATGTGAA 22509
|||| || | || ||||| |||| || || | | ||| ||||| || || ||| |
Sbjct 334295 GGTTAACAATCTGGAACTCACCGGCTAAAACTCTTC--TGGAATAAATATTAGAGGTGTA 334238
Query 22510 CGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGC 22569
||||| ||| ||||||||| |||| || |||| || || || || ||||| || ||
Sbjct 334237 TGGTTCAAAACATTCATTGTAACCCAAAATTTGAGAAGTGGAGGCAGTTGGCATTGGTGC 334178
Query 22570 CAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAG--CATCGACCAG 22627
| | || ||||||||||| || ||| ||||| || ||| | |||| |||
Sbjct 334177 AACTAATAAAGAGTTTCTCAAACCAAACTTGGAAATCTTTTCCTTTAATCCATC--CCAA 334120
Query 22628 TCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTC 22687
||||| | |||| ||| || || |||||| ||| |||| || | || ||||
Sbjct 334119 TCCCATAAGTCGGTTGGCTTC---TTACCCCACAAATCAAATTGTAATAAACCTTGACTT 334063
Query 22688 GCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCC 22747
|| || ||||||||| ||||| || ||||| | | ||| || || || ||
Sbjct 334062 GCTGGAGAGCCTTCGTAGGTTTCATATGGACCGTCAACTTTGGCCAGCTCAATACTAGCT 334003
Query 22748 TCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACG 22807
||||| | ||| |||||||| || || |||| |||| | ||| || | |
Sbjct 334002 TCCAATGAAGCGTGGTATATAGTTTCAAAAATTTGTATGTTTAGTTCTCTAGCCTGGGCA 333943
Query 22808 CTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCG 22867
|| | |||| | | ||||| ||| || || || | ||| ||||| || | | |
Sbjct 333942 GAATCAAATGGCAATCTTAACATCATGAAGGCATCAGCTAAACCTTGAACCCCAACAGCA 333883
Query 22868 ATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCG 22927
|| |||| |||| ||| || || | | || || | ||||| | || |||
Sbjct 333882 ATTGGTCTGTTTCTCATGTTGGATCTTCTAGCTTCTTCAACCGGATAATAGTTTCTGTCG 333823
Query 22928 ATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCG 22987
|| | | ||||| || ||| |||| ||| ||||| |||||||
Sbjct 333822 ATGATCTTATTCAAATTCTTGGCAACAACTTTGGTTATTTCATGTAATTTCTCAAAGT-- 333765
Query 22988 TAAACGCCCGAT---TGTACAACA-----AACT--TGTTG--ACGGCGATCGAGGCAAGA 23035
|| || | |||| | | || || ||| || || | || | || || |
Sbjct 333764 TATAC-CACGATGAGTTTTCATCACTTTCAACAAATGCTGGTAATGCAACTGATGCTAAG 333706
Query 23036 TTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTA 23095
|| || || || || || ||| ||| | ||| || ||||| || ||| ||||| |
Sbjct 333705 TTACAAACAGCAACTTCTTCTGGGGAAGAGTATTCAACAATCTCACAACACAGATTAGAA 333646
Query 23096 CACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGC 23155
| || ||| | ||||| || |||||| ||| | ||||| | |||||| || |||
Sbjct 333645 GATTTGATCATACCCAAGTTCTGTTGGTTGGATTTCCTGTTGCATGCATCCTTATAAAGC 333586
Query 23156 ATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCG 23215
||| | || || || || || ||| | || | || | ||| | | |||||
Sbjct 333585 ATGAATGGTGTACCGGTTTCTGTCTGTGCTTCCAAAATAGAGTACCATAATTTTTGAGCC 333526
Query 23216 TGAACACGTCGCACGTACCTG--CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATT 23273
| | || | | ||||| ||||||| || || |||| ||| || | || ||||
Sbjct 333525 TTGATG-GTGGATC-TACCTCTACCTTCTTTTTCATATTTTTCGTATAATTCTTCGAATT 333468
Query 23274 CGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACA-TT 23332
| |||| ||| || || || || | || | || | | ||| |||| ||
Sbjct 333467 CATCACCATAAACATCACTCAAACCTGGGGCTTCACTTGGTGAAAAAAGAGTCCATTCTT 333408
Query 23333 GAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCG 23392
|| | |||||||| | |||| || | ||| | ||||||| || ||||| ||
Sbjct 333407 GATTG-TTTTCAACTCTCTTCATGAATAAATCAGAAATCCATAATGCAGGGAACAAATCT 333349
Query 23393 CGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCC 23452
| || | | || || || || ||| ||| | | || | |||||| || | ||
Sbjct 333348 CTTGCTCTGATTTCTTCCTTACCATGGTTTTTTCTAATGTCAATAAAGTCTAAAATATCT 333289
Query 23453 GCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCG 23512
|| ||||| |||||||| || | ||||| || || ||||| || || || || ||||||
Sbjct 333288 GCGTGCCATGGCTCGAGATATAAAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCG 333229
Query 23513 ACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCG 23572
|| || | || || ||||| ||||||| | ||| || | || ||||||||| | |||
Sbjct 333228 ACATATCTAGCGGTATTGTTAAACACTCTAACCATTGGAATGATACCGTTGGATGTACCG 333169
Query 23573 CCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCT 23632
|| || | | ||||| | | || || ||||||| ||| ||||| || ||
Sbjct 333168 TTGGTACCTGCAATATAAGAACCGGTCGATCTAATATTGTGAATGTGTAAACCAATACCA 333109
Query 23633 CCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTG 23692
|| | | || || |||| || |||||||| | || || || || || || ||
Sbjct 333108 CCAGCAGTCTTGGAAATCAGAGCACATTGTTTTAAGGTATCATAAATACCTTCAATAGAA 333049
Query 23693 TCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAG 23752
|| |||| | || || |||||||| ||||||||||| | | || ||| | ||
Sbjct 333048 TCATCTTGCATAGCAACTAAGAAACAAGAAGACATTTGATTTCTTGGGGTACCAGCATTA 332989
Query 23753 AACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATG 23812
|||| || || || || |||||||||| || ||||||||||| || || || ||
Sbjct 332988 AACAAAGTTGGAGAAGCATGGGTAAAGTATCTTTTAGACATTAGATTATAGGTTTCAATA 332929
Query 23813 GCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGT 23872
|| | || || || || || ||||| | || || | ||| |||| | ||||||
Sbjct 332928 GCACTTTGTATATCATCACCATGAATACCAACAGCAACTCTCATAATCAAATGCTGAGGT 332869
Query 23873 CTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCA 23932
|| || | | || || | | | |||| ||| || | || || |||||| || |||
Sbjct 332868 CTTTCTGCAATTTGACCATTCAATCTCAACAAATAAGATCTTTCCAACGTTTTGAAACCA 332809
Query 23933 AAATAGTCATAGTTAAAGTCACGATC 23958
||||||| ||||| || || | |||
Sbjct 332808 AAATAGTTGTAGTTGAAATCTCTATC 332783
>seq5
Length=831479
Score = 188 bits (208), Expect = 6e-43
Identities = 595/907 (66%), Gaps = 29/907 (3%)
Strand=Plus/Plus
Query 57537 AGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAA 57596
|||||||| | || || || |||| | || || ||| | |||||||||||||| |||
Sbjct 304403 AGATTTGTGCTCTTCCCAATCAAATACCATGAAATCTGGCAAATGTACAAAAAGGCCGAA 304462
Query 57597 GCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCC 57656
|| || || ||||||| ||||||| | ||| |||||||||| | ||| ||| | |
Sbjct 304463 GCGTCTTTCTGGACCGCCGAAGAAATTGACTTGTCTAAGGACTTACACGACTGGAACAAC 304522
Query 57657 ---CTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCC 57713
|| || || || ||| ||| |||| |||||||| ||||| || || ||
Sbjct 304523 AGACTAAATGATAACGAAAGATTTTTCATTACCAGAGTGTTGGCCTTTTTTGCTGCTTCA 304582
Query 57714 GATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAG 57773
||||||||||| ||||| |||||||| |||| || || || |||||| | | ||
Sbjct 304583 GATGGTATTGTCAACGAAAATTTGGTTGAAAACTTCTCGGCTGAGGTGCAAATCCCTGAA 304642
Query 57774 GCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCG 57833
|| | || || || || || ||| | || |||||| | ||||| |||| || ||
Sbjct 304643 GCCAAGTGTTTCTATGGTTTCCAAATCATGATGGAAAACATCCATTCGGAAACATACTCC 304702
Query 57834 CTACTCATCGATACGTACGTGAAGGA--CAACGACGAGAAACGTA--GACTGTTCAACGC 57889
|| | || || || || || ||||| ||| | ||| || | | ||||| ||
Sbjct 304703 TTATTGATTGACACCTATGTCAAGGATCCAAAG----GAATCGGAATTCTTATTCAATGC 304758
Query 57890 GATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAG 57949
|| |||| || || || | ||||| || ||| | || | ||||||
Sbjct 304759 CATTGAAAACATTCCATGTATTAAAGAAAAGGCCGACTGGGCCATGAGATGGATGTGCGA 304818
Query 57950 CGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTT 58009
| | || |||| || || || | || || ||||| || |||||||| || ||
Sbjct 304819 TGAAAATGCATTATTCGGTGAAAGATTAGTTGCCTTTGCCGCTGTTGAAGGTATCTTTTT 304878
Query 58010 TTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGAC 58069
|| || ||||| | || || ||| |||| ||| | || ||||||| || ||||
Sbjct 304879 CTCCGGATCGTTTGCTTCCATTTTCTGGTTGAAAAAAAGAGGTTTGATGCCAGGTTTGAC 304938
Query 58070 GTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAAT 58129
||| |||||| || || | | || || ||| | || || |||||||| || ||
Sbjct 304939 ATTTTCCAACGAATTAATTTGCAGAGATGAAGGTTTACACACCGATTTTGCTTGTTTA-- 304996
Query 58130 GTACTCTCACATTGTCAATAAACCGACGCGGGATCGC---ATCTTGGACATTATCACC-- 58184
|| |||| |||| | || || || | ||| | ||| || || |||| |
Sbjct 304997 TTATTCTCCCATT-TGAACAA---TACCCCAGATTCCAAGATCGTGCTCAAGATCATCGA 305052
Query 58185 -GAGGCGGTCGCGATCGAA-AATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCG 58242
|| || || | || ||| || || | | |||| || || || || | | | || |
Sbjct 305053 AGAAGCTGTTGAAATTGAACAAAGA-TATTTCACAGACGCTCTTCCAGCCAACTTACTTG 305111
Query 58243 GTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTT-TTGCTC 58301
|||||||||| |||||||||| | || | || |||||||||||||||||| ||| |
Sbjct 305112 GTATGAACAAAGATTTGATGTGTCAATATGTCGAATTTGTTGCCGACAGACTTCTTGTTT 305171
Query 58302 GAACTGATTG-GAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGAT 58360
|| ||| || | | | |||||| | |||||| |||||||| ||| | ||
Sbjct 305172 CTCTTGGTTGTGACA-AGAGA-TACAACGTCACAAATCCTTTTGATTTCATGGAAAACAT 305229
Query 58361 CTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAATACGG 58420
||| | | || ||||| ||||| || ||||| | ||| ||| || ||||| |||
Sbjct 305230 CTCTTTAGCTGGTAAGACCAACTTCTTTGAAAAGAGAGTCTCCGATTACCAAAAGGCCGG 305289
Query 58421 CGTGATG 58427
|| |||
Sbjct 305290 TGTCATG 305296
Score = 89.7 bits (98), Expect = 5e-13
Identities = 159/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||||||||| || ||||| | || || || || ||||| | || |||||| |
Sbjct 265442 AAGATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCT 265501
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | | || | ||||| || | || || |||||||| | || || |||
Sbjct 265502 TCTGATACCATTGACAACGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCTGAC 265561
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | | || |||||||| || || || |||||| || || | ||| ||
Sbjct 265562 CAACAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGACGGTAGAACCTTATCCGACTAC 265621
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| ||||| ||||| |||||||| |||| | ||| | || || ||||
Sbjct 265622 AACATCCAAAAGGAATCCACTCTTCACTTGGTGTTGAGATTAAGAGGTGGTA 265673
>seq2
Length=1335671
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| |||||||||||||| || || || || || || || || ||| | || || ||| |
Sbjct 4836 AAAATGCAAATTTTCGTTAAAACCCTTACCGGTAAGACCATTACCCTTGAAGTCGAATCT 4895
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
||||||| | || | ||||| || | || ||||||||||| | || || |||
Sbjct 4896 TCCGACACCATTGACAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 4955
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | |||| || ||||| || || ||||||||| || || | || ||
Sbjct 4956 CAACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCTGACTAC 5015
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||||| ||||| ||||| || ||||| | || | ||| |||| || |||
Sbjct 5016 AACATCCAAAAGGAATCCACCCTTCACTTAGTCTTGAGATTGAGAGGTGGT 5066
>seq6
Length=817167
Score = 93.3 bits (102), Expect = 4e-14
Identities = 114/156 (73%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || ||||| || || || ||||| |||||| | || || || ||||
Sbjct 642374 ATGCAGATCTTTGTCAAGACACTTACGGGTAAAACTATCACCCTAGAGGTGGAGTCGTCA 642433
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | || ||||||| || |||||||||||| | || || |||||
Sbjct 642434 GACACCATTGACAATGTGAAACAGAAGATTCAGGACAAGGAAGGTATTCCACCTGACCAA 642493
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348
||| | | || || ||||| |||||||||||||||
Sbjct 642494 CAGAGATTGATCTTTGCTGGTAAACAGTTGGAAGAC 642529
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766193833040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |