Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq4 470 2e-127
seq5 246 4e-60
>seq4
Length=942658
Score = 470 bits (520), Expect = 2e-127
Identities = 1384/2126 (65%), Gaps = 27/2126 (1%)
Strand=Plus/Minus
Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105
||||||||||||| ||||| || | || || | | || ||||| || || || |
Sbjct 334632 GTGAATTGAATGGCAGCGGCAGCAGCTTGAGTTCTCAAGTAATACATACCAGTCTTCAAT 334573
Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCTGCTAT 62164
|| ||||||| || |||||||| || ||||| || || ||| ||
Sbjct 334572 CCCTTCTTCCATCCATAGAAATGCATCGATGTCAGTTTACCCATGGTAGGGTTCTT-TAG 334514
Query 62165 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 62224
|| || |||||| |||| |||||| ||| |||| || ||||| |||||||| | ||
Sbjct 334513 GTGAATGTTCATACTTTGAGATTGATCAATGTAGGCACCTCTGTCGGCAGCCATATCGAT 334454
Query 62225 GATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 62284
|| | |||||| | |||||||||| || || || | ||| || |||| |||||
Sbjct 334453 AATAGACTTTTGCGAGATTTCCCAAACTGTCTTGTAGATATCCTTGATTTCTTGTGGAAT 334394
Query 62285 GTTTGTA---TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATT 62341
||| | || ||||| || || || ||||| ||||| || ||| ||
Sbjct 334393 GTTAGGCAAGTTTTGAATCGACCCGTTGTCAGAAATAATGTGGTTCTTCATGGAATCGTT 334334
Query 62342 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCC 62401
||||||| | || || |||| | | | |||||||| | ||||| || ||
Sbjct 334333 CCATAATCCCATATCAACCAAGTCTCTCAACATGTAAGGGTTAACAATCTGGAACTCACC 334274
Query 62402 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCC 62461
| || ||||| | | ||||||||| ||| || ||||| | | ||||| | ||
Sbjct 334273 GGCTAAAACTCTTCTGGAATAAATATTAGAGGTGTATGGTTCAAAACATTCATTGTAACC 334214
Query 62462 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62521
||||||||||| ||| || ||||| ||||| ||||| || |||||| ||||| | |||
Sbjct 334213 CAAAATTTGAGAAGTGGAGGCAGTTGGCATTGGTGCAACTAATAAAGAGTTTCTCAAACC 334154
Query 62522 GTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAACANN 62581
| | || || || |||| ||||||| ||| | || | || |
Sbjct 334153 AAACTTGGAAATCTTTTCCTTTAATCCATCCCAATCCCATAAGTCGGTTGGCTTCTTACC 334094
Query 62582 NNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCATATGG 62641
| |||||| | ||| | ||| || || ||| | || || ||||||||
Sbjct 334093 CCACAAATCAAATTGTAATAAACCTTGACTTGCTGGAGAGCCTTCGTAGGTTTCATATGG 334034
Query 62642 TCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAA 62701
|| || | || || | | ||| || || |||| | ||| || || ||||||||
Sbjct 334033 ACCGTCAACTTTGGCCAGCTCAATACTAGCTTCCAATGAAGCGTGGTATATAGTTTCAAA 333974
Query 62702 GATCTTCTTATTTAGATCTTGTGCTTCCGGGCT--ATCAAATGGATAATTTAAGAGAATA 62759
|| | | ||||| ||| || | |||| ||||||||| | |||| | ||
Sbjct 333973 AATTTGTATGTTTAGTTCTCTAGCCT--GGGCAGAATCAAATGGCAATCTTAACATCATG 333916
Query 62760 AACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATT 62819
|| || || ||||| |||||||| |||| | | || ||||| | |||| | || || ||
Sbjct 333915 AAGGCATCAGCTAAACCTTGAACCCCAACAGCAATTGGTCTGTTTCTCATGTTGGATCTT 333856
Query 62820 TCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATT 62879
||||||| || |||||||| || | || || || ||||| | ||| || |||
Sbjct 333855 CTAGCTTCTTCAACCGGATAATAGTTTCTGTCGATGATCTTATTCAAATTCTTGGCAACA 333796
Query 62880 ACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCC---------CATCTATTACA 62930
|||||| | || | | ||| ||| | | | | | |||| || ||
Sbjct 333795 ACTTTGGTTATTTCATGTAATTTCTCAAAGTTATACCACGATGAGTTTTCATCACTTTCA 333736
Query 62931 A-ACATGTTC--AATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCA 62987
| | ||| | |||||||| ||||| | ||||| || || || || | | |
Sbjct 333735 ACAAATGCTGGTAATGCAACTGATGCTAAGTTACAAACAGCAACTTCTTCTGGGGAAGAG 333676
Query 62988 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTA 63047
|||| | |||||| || |||||| | | ||||| | || || || ||||| ||
Sbjct 333675 TATTCAACAATCTCACAACACAGATTAGAAGATTTGATCATACCCAAGTTCTGTTGGTTG 333616
Query 63048 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGAT 63107
|| |||| || |||||||||||||| |||||||| ||||| ||||| |||| | |
Sbjct 333615 GATTTCCTGTTGCATGCATCCTTATAAAGCATGAATGGTGTACCGGTTTCTGTCTGTGCT 333556
Query 63108 TCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT 63167
|| | ||| | | ||| | | ||||||| || | ||| | ||| | |||| ||
Sbjct 333555 TCCAAAATAGAGTACCATAATTTTTGAGCCTTGATGGTGGATCTACCTCTACCTTCTTTT 333496
Query 63168 TCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTG-TCCAATCTAGGACA 63226
|| ||| || ||| |||||| || || || |||||| || || || || |
Sbjct 333495 TCATATTTTTCGTATAATTCTTCGAATTCATCACCATAAACATCACTCAAACCTGGGGC- 333437
Query 63227 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 63286
|||| || | | | | ||| ||| | | | |||| ||||| || | |||
Sbjct 333436 TTCACTTGGTGAAAAAAGAGTCCATTCTTGATTGTTTTCAACTCTCTTCATGAATAAATC 333377
Query 63287 AGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTT 63346
|| |||||| | || || | |||||||| ||| ||| || || || || ||
Sbjct 333376 AGAAATCCATAATGCAGGGAACAAATCTCTTGCTCTGATTTCTTCCTTACCATGGTTTTT 333317
Query 63347 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAAC 63406
| ||| || | || | | |||||| | ||||| || || | |||| || | |
Sbjct 333316 TCTAATGTCAATAAAGTCTAAAATATCTGCGTGCCATGGCTCGAGATATAAAGCAAAGGC 333257
Query 63407 TCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAA 63466
||||| | |||||| || || ||||| | ||||||||||| || ||| | ||||| |
Sbjct 333256 ACCAGGTCTTTTGTTACCACCTTGATCGACATATCTAGCGGTATTGTTAAACACTCTAAC 333197
Query 63467 CATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACG 63526
||||||||| |||||||| ||| |||| |||||||| | ||||| || | | |
Sbjct 333196 CATTGGAATGATACCGTTGGATGTACCGTTGGTACCTGCAATATAAGAACCGGTCGATCT 333137
Query 63527 AATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTT 63586
|||||| ||| || ||| || || || || | || || || | || ||| ||||
Sbjct 333136 AATATTGTGAATGTGTAAACCAATACCACCAGCAGTCTTGGAAATCAGAGCACATTGTTT 333077
Query 63587 TAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGA 63646
||| || ||||| || ||||| || |||||| ||| || || ||||| |||
Sbjct 333076 TAAGGTATCATAAATACCTTCAATAGAATCATCTTGCATAGCAACTAAGAAACAAGAAGA 333017
Query 63647 CATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTT 63706
|||||| | | | || || |||||||| || || |||||||| || ||||| || |
Sbjct 333016 CATTTGATTTCTTGGGGTACCAGCATTAAACAAAGTTGGAGAAGCATGGGTAAAGTATCT 332957
Query 63707 TTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTAC 63766
|| ||| | |||||| || || |||||||| | |||||| |||||| || ||
Sbjct 332956 TTTAGACATTAGATTATAGGTTTCAATAGCACTTTGTATATCATCACCATGAATACCAAC 332897
Query 63767 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAA 63826
|| || | ||| | || |||||||||||||| |||||| || | | |||||||
Sbjct 332896 AGCAACTCTCATAATCAAATGCTGAGGTCTTTCTGCAATTTGACCATTCAATCTCAACAA 332837
Query 63827 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAA 63884
|| ||| ||||||| ||||| ||||||||||||||||| ||||| |||| || |||
Sbjct 332836 ATAAGATCTTTCCAACGTTTTGAAACCAAAATAGTTGTAGTTGAAA--TCTCTATCATAA 332779
Query 63885 ATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATACTTGAA 63944
|||| | | || ||| || ||| | || || ||| ||| | |||
Sbjct 332778 TGAATAGCGTCGTCAAGAACATCAGCATTTTTTTGGACAATTTCCCAGGTGTCATCGGAA 332719
Query 63945 ATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACT 64004
|| || ||||| ||||| || || || |||| ||||| ||| | || | || | ||||
Sbjct 332718 ATCATTGGAGAGTGTTTACCGTTCTTTGGATCGACATATTTGTACAATTGGTCAACCACT 332659
Query 64005 TCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGA 64064
|| ||| |||| | |||| || || | || || || || | ||| || || | |
Sbjct 332658 TCGGAGAATTTTTTTGTGGTTTGTTTTTGCAAGTTAGAAATCGCCACTCTTGCTGCCAAA 332599
Query 64065 ATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCC 64124
| || ||||| ||||| || || | ||||| |||| ||||| | | |||
Sbjct 332598 ACTGCGTAATCTGGATGGATGGTGGTCATATATGCTGCAGTTTCTGCTGCTAAGTTATCC 332539
Query 64125 AATTCTACCGTTGTTACTCCATTATA 64150
|| || ||||| | || |||| |||
Sbjct 332538 AACTCCACCGTGGAAACACCATCATA 332513
>seq5
Length=831479
Score = 246 bits (272), Expect = 4e-60
Identities = 597/891 (67%), Gaps = 26/891 (3%)
Strand=Plus/Minus
Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350
|||||||| || || | ||||| || || || || || || | || || || |||
Sbjct 305283 TTTTGGTAATCGGAGACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTT 305224
Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410
|||||||||||||| ||||| || || ||||| | || | | | || | ||||| |
Sbjct 305223 TCCATGAAATCAAAAGGATTTGTGACGTTGTATCTCTTGTCACAACCAAG---AGAAA-C 305168
Query 33411 AA----TCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT 33466
|| ||| || || || ||||| | |||| ||||| || ||||| || |
Sbjct 305167 AAGAAGTCTGTCGGCAACAAATTCGACATATTGACACATCAAATCTTTGTTCATACCAAG 305108
Query 33467 GAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTAT 33526
| || |||||||||| | || | | || ||||||||| || || | | ||
Sbjct 305107 TAAGTTGGCTGGAAGAGCGTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTTCGAT 305048
Query 33527 AATAAATCTAACGGTTTCTTCACTCGGTGGATGTAAT-AAATGTTTAAACATCAAACATG 33585
|| ||| | | | | || | || | | ||||| || | ||||| |
Sbjct 305047 GATCTTGAGCACGATCT-TGGAATCTGGGGTATTGTTCAAATGGGAGAATAATAAACAAG 304989
Query 33586 CGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGG 33645
| |||||| ||| | ||| || ||||| | |||||||||||| ||||| || | || |
Sbjct 304988 CAAAATCGGTGTGTAAACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAACCTG 304929
Query 33646 GCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTC 33705
|||| | || | ||||| | ||| || |||||||| || |||||||| || ||||| |
Sbjct 304928 GCATCAAACCTCTTTTTTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAGATAC 304869
Query 33706 CTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCGCTGTCAT---GTAT 33760
|||| || || |||||||||| | ||| || || |||| || | |||| ||
Sbjct 304868 CTTCAACAGCGGCAAAGGCAACTAATCTTTCACCGAATAA--TGCATTTTCATCGCACAT 304811
Query 33761 CCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAA 33819
||| || || ||||| |||||||| | ||| | ||| || || |||| |||||||| |
Sbjct 304810 CCATCTCATG-GCCCAGTCGGCCTTTTCTTTAATACATGGAATGTTTTCAATGGCATTGA 304752
Query 33820 AGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCA--AAAGACTATACAT 33877
| | | | ||| || ||| || ||||| || || |||| || || ||| |
Sbjct 304751 ATAAGAATTCCGATTCCTTTGGATCCTTGACATAGGTGTCAATCAATAAGGAGTAT--GT 304694
Query 33878 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33937
||||||||| |||||||| || || || || || |||||||| | || || | ||
Sbjct 304693 TTCCGAATGGATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCAGGGAT 304634
Query 33938 CTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGC 33997
||||| || | | || ||| | |||||||| || || || ||||| || ||
Sbjct 304633 TTGCACCTCAGCCGAGAAGTTTTCAACCAAATTTTCGTTGACAATACCATCTGAAGCAGC 304574
Query 33998 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCA 34054
|||||| ||||| || | || ||| || |||||| ||||| || |||||
Sbjct 304573 AAAAAAGGCCAACACTCTGGTAATGAAAAATCTTTCGTTATCATTTAGTCTGTTGTTCCA 304514
Query 34055 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 34114
|| | | || ||||| | || | |||||| | ||||| || || || || |||||
Sbjct 304513 GTCGTGTAAGTCCTTAGACAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGGCCTT 304454
Query 34115 TTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 34165
||| ||||| | |||||| ||||| |||| ||||||||| | ||||||||
Sbjct 304453 TTTGTACATTTGCCAGATTTCATGGTATTTGATTGGGAAGAGCACAAATCT 304403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817308709360
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