Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq4 526 2e-144
seq5 196 5e-45
>seq4
Length=942658
Score = 526 bits (582), Expect = 2e-144
Identities = 1224/1832 (67%), Gaps = 33/1832 (2%)
Strand=Plus/Minus
Query 36826 GTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATACTG 36885
||||||| |||||||| ||||| || | ||| ||||||| || ||||||||
Sbjct 334602 GTTCTCAAGTAATACATACCAGTCTTCAATCCCTTCTTCCATCCATAGAAATGCATCGAT 334543
Query 36886 GTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTCATTGATTGACTTTGATCTATA 36945
|||||||| | ||||| || | || | || |||| |||| |||||| ||
Sbjct 334542 GTCAGTTTACCCATGGTAGGGTTCTTTAGGTGAATGTTCATACTTTGAGATTGATCAATG 334483
Query 36946 AACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTT 37005
| |||||||||||||| ||||| || | |||| | ||||| || || |||||||| ||
Sbjct 334482 TAGGCACCTCTGTCGGCAGCCATATCGATAATAGACTTTTGCGAGATTTCCCAAACTGTC 334423
Query 37006 TTATATATTTGTTTTATATTATCTGGTAAATCT-----AAATGTTGAATAGAACCATTAT 37060
|| || || | || || | | ||| ||| | || | |||||| || || || |
Sbjct 334422 TTGTAGATATCCTTGATTTCTTGTGG--AATGTTAGGCAAGTTTTGAATCGACCCGTTGT 334365
Query 37061 GTAACACAATTGTATTCTTTATGTCATTATTCCACATATTTC-TACTTATTAGTTCTCTC 37119
| | ||| ||||| ||| || ||||| | || | || | | ||||||
Sbjct 334364 CAGAAATAATGTGGTTCTTCATGGAATCGTTCCATA-ATCCCATATCAACCAAGTCTCTC 334306
Query 37120 AATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTG 37179
|| | || || || |||| ||| || || || | ||| |||||||| | ||| |||||
Sbjct 334305 AACATGTAAGGGTTAACAATCTGGAACTCACCGGCTAAAACTCTTCTGGAATAAATATTA 334246
Query 37180 CTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGC 37239
|| |||||||||| | ||||| | || || |||||||| || || ||||| |||
Sbjct 334245 GAGGTGTATGGTTCAAAACATTCATTGTAACCCAAAATTTGAGAAGTGGAGGCAGTTGGC 334186
Query 37240 ATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCA 37299
|||||||| | || | |||||||| ||| | ||| | | |||| | ||
Sbjct 334185 ATTGGTGCAACTAATAAAGAGTTTCTCAAACCAAACTTGGAAATCTTTTCCTTTAATCCA 334126
Query 37300 TTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACCTTTA 37359
| |||||||||||| || ||||| ||||| ||||| |||| |||||| | ||||| |
Sbjct 334125 TCCCAATCCCATAAGTCGGTTGGCTTCTTACCCCACAAATCAAATTGTAATAAACCTTGA 334066
Query 37360 CTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTA 37419
|| |||||||| | | || || ||||| || |||| || ||| || || || ||||
Sbjct 334065 CTTGCTGGAGAGCCTTCGTAGGTTTCATATGGACCGTCAACTTTGGCCAGCTCAATACTA 334006
Query 37420 GATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCT 37479
| ||| | || || | ||||| ||||| ||||||||||| |||| | | | || |
Sbjct 334005 GCTTCCAATGAAGCGTGGTATATAGTTTCAAAAATTTGTATGTTTAGTTCTCTAGCCTGG 333946
Query 37480 TCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATA 37539
| ||| |||| | | || | || || ||||||| ||||| ||||| || | |
Sbjct 333945 GCAGAATCAAATGGCAATCTTAACATCATGAAGGCATCAGCTAAACCTTGAACCCCAACA 333886
Query 37540 CCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAATTGATA 37599
| || ||||| | | || | || ||||| | |||| || |||||||| || |
Sbjct 333885 GCAATTGGTCTGTTTCTCATGTTGGATCTTCTAGCTTCTTCAACCGGATAATAGTTTCTG 333826
Query 37600 TCTATTATTTTATTTAGATTTTT------AACTA--GTATTTTC--GTAATTATTCTCAA 37649
|| || || ||||| | ||| || |||| || |||| |||||| ||||||
Sbjct 333825 TCGATGATCTTATTCAAATTCTTGGCAACAACTTTGGTTATTTCATGTAATT--TCTCAA 333768
Query 37650 C-TTGTCGAAC-ATAAATA--CGTTATTATTAACAAATTTACTCAACGAAATAGATCCTA 37705
|| | || || | | | | | | | ||||||| || | || ||| |||
Sbjct 333767 AGTTATACCACGATGAGTTTTCATCACTTTCAACAAATGCTGGTAATGCAACTGATGCTA 333708
Query 37706 GATTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTACAGAGATTAC 37765
||||| ||||||||||| ||| | | ||| | |||||| ||| ||||||
Sbjct 333707 AGTTACAAACAGCAACTTCTTCTGGGGAAGAGTATTCAACAATCTCACAACACAGATTAG 333648
Query 37766 TCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATA 37825
||| | || | ||||| || ||| |||||||| | || || | ||| ||||| |
Sbjct 333647 AAGATTTGATCATACCCAAGTTCTGTTGGTTGGATTTCCTGTTGCATGCATCCTTATAAA 333588
Query 37826 GTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTTG 37885
| || | || || || |||| | || || || | |||||| | |||||| || |
Sbjct 333587 GCATGAATGGTGTACCGGTTTCTGTCTGTGCTTCCAAAATAGAGTACCATAATTTTTGAG 333528
Query 37886 CTTTAACGATCGCTTTAAttttt--ttCTTTGTTTCGTATTCTATATATAATTTGTTAAA 37943
| || | | | | | || | | |||||| ||| |||| | ||||||| | ||
Sbjct 333527 CCTTGATGGTGGATCTACCTCTACCTTCTTT--TTCATATTTTTCGTATAATTCTTCGAA 333470
Query 37944 ATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTC 38003
|||| || | ||||| | || ||||| ||| | ||| | | |||| ||||||
Sbjct 333469 TTCATCACCATAAACATCACTCAAACCTGGGGCTTCACTTGGTGAAAAAAGAGTCCATTC 333410
Query 38004 TTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATC 38063
|| || ||||| || | | ||| |||||||||| | ||||||||||| || |||||
Sbjct 333409 TTGATTGTTTTCAACTCTCTTCATGAATAAATCAGAAATCCATAATGCAGGGAACAAATC 333350
Query 38064 TTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATC 38123
| | | ||| |||||| || || || ||||| | | | ||| || || |||||
Sbjct 333349 TCTTGCTCTGATTTCTTCCTTACCATGGTTTTTTCTAATGTCAATAAAGTCTAAAATATC 333290
Query 38124 AGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATT 38183
||||||||||| || | ||| | | | || || |||||||| | ||| || ||||
Sbjct 333289 TGCGTGCCATGGCTCGAGATATAAAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATC 333230
Query 38184 AATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCC 38243
| ||||||| | || || ||| | | ||| | ||| || | ||||| || ||| | ||
Sbjct 333229 GACATATCTAGCGGTATTGTTAAACACTCTAACCATTGGAATGATACCGTTGGATGTACC 333170
Query 38244 GTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCC 38303
||| |||| | ||||||| ||| | | || ||||| || || || || ||
Sbjct 333169 GTTGGTACCTGCAATATAAGAACCGGTCGATCTAATATTGTGAATGTGTAAACCAATACC 333110
Query 38304 ACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACT 38363
||| ||| || || || | ||| ||||||||||| |||||| | |||||||| |||
Sbjct 333109 ACCAGCAGTCTTGGAAATCAGAGCACATTGTTTTAAGGTATCATAAATACCTTCAATAGA 333050
Query 38364 GTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTT 38423
||||| | || | | || |||||| |||||||||| ||| || || || ||
Sbjct 333049 ATCATCTTGCATAGCAACTAAGAAACAAGAAGACATTTGATTTCTTGGGGTACCAGCATT 332990
Query 38424 AAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTAT 38483
||| || || ||||| ||||| | || || ||| |||| |||||| ||||| ||
Sbjct 332989 AAACAAAGTTGGAGAAGCATGGGTAAAGTATCTTTTAGACATTAGATTATAGGTTTCAAT 332930
Query 38484 TACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGG 38543
|| | ||||||| | || |||||||| | || || ||||| | || ||| || ||
Sbjct 332929 AGCACTTTGTATATCATCACCATGAATACCAACAGCAACTCTCATAATCAAATGCTGAGG 332870
Query 38544 TCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCC 38603
||||||| |||| | |||| | | | | ||| ||| |||| || ||||| | ||
Sbjct 332869 TCTTTCTGCAATTTGACCATTCAATCTCAACAAATAAGATCTTTCCAACGTTTTGAAACC 332810
Query 38604 AAAATAACTATA--TGAATAATCTCTATCGTA 38633
|||||| | || ||| |||||||||| ||
Sbjct 332809 AAAATAGTTGTAGTTGA--AATCTCTATCATA 332780
>seq5
Length=831479
Score = 196 bits (216), Expect = 5e-45
Identities = 399/585 (68%), Gaps = 12/585 (2%)
Strand=Plus/Minus
Query 11626 TAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGT 11685
|||||| |||||||| ||||||||||| ||||| | |||| ||| || ||||||||
Sbjct 304996 TAAACAAGCAAAATCGGTGTGTAAACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGT 304937
Query 11686 TAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAA 11745
|| || |||||||| |||| |||||| | ||| || || | |||||| || || || ||
Sbjct 304936 CAAACCTGGCATCAAACCTCTTTTTTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAA 304877
Query 11746 GAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCC--ATATACCTTGTTGCTA 11803
|| || || || ||||| ||||| || |||| |||||| || ||| | | || |
Sbjct 304876 AAAGATACCTTCAACAGCGGCAAAGGCAACTAATCTTTCACCGAATAATGCATTTTCATC 304817
Query 11804 G-ATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGC 11862
| | |||||| | ||||||| || || || | ||| | ||| || |||| || ||
Sbjct 304816 GCACATCCATCTCATGGCCCAGTCGGCCTTTTCTTTAATACATGGAATGTTTTCAATGGC 304757
Query 11863 GTTAAATAAATGCATT--TTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTA 11920
|| ||||| | ||| ||| | ||| | ||||| || || || |||||
Sbjct 304756 ATTGAATAA--GAATTCCGATTCCTTTGGATCCTTGACATAGGTGTCAATCAATAAGGAG 304699
Query 11921 TACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCT 11980
|| |||| ||||| || |||||||| ||||| || ||||||||||| || ||
Sbjct 304698 TATGTTTCCGAATGGATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCA 304639
Query 11981 GAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTA 12040
| || || || | | || |||| | ||||| || || ||||||||||| |
Sbjct 304638 GGGATTTGCACCTCAGCCGAGAAGTTTTCAACCAAATTTTCGTTGACAATACCATCTGAA 304579
Query 12041 GATGCAAAAAATGCTAGTA-TATGTTTTATAAAGTATTTTTCGTCTTTAGTTAAT---TT 12096
| |||||||| || | | | || | || || || |||||| | | ||| | ||
Sbjct 304578 GCAGCAAAAAAGGCCAACACTCTG-GTAATGAAAAATCTTTCGTTATCATTTAGTCTGTT 304520
Query 12097 ATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCAC 12156
| ||| || | ||| || || || || || | |||||| ||||||| ||| || |
Sbjct 304519 GTTCCAGTCGTGTAAGTCCTTAGACAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTC 304460
Query 12157 TGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAA 12201
| | ||| ||||||| |||||| ||||| || || || |||||
Sbjct 304459 GGCCTTTTTGTACATTTGCCAGATTTCATGGTATTTGATTGGGAA 304415
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468524583307280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |