Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq4 526 2e-144 seq5 196 5e-45 >seq4 Length=942658 Score = 526 bits (582), Expect = 2e-144 Identities = 1224/1832 (67%), Gaps = 33/1832 (2%) Strand=Plus/Minus Query 36826 GTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATACTG 36885 ||||||| |||||||| ||||| || | ||| ||||||| || |||||||| Sbjct 334602 GTTCTCAAGTAATACATACCAGTCTTCAATCCCTTCTTCCATCCATAGAAATGCATCGAT 334543 Query 36886 GTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTCATTGATTGACTTTGATCTATA 36945 |||||||| | ||||| || | || | || |||| |||| |||||| || Sbjct 334542 GTCAGTTTACCCATGGTAGGGTTCTTTAGGTGAATGTTCATACTTTGAGATTGATCAATG 334483 Query 36946 AACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTT 37005 | |||||||||||||| ||||| || | |||| | ||||| || || |||||||| || Sbjct 334482 TAGGCACCTCTGTCGGCAGCCATATCGATAATAGACTTTTGCGAGATTTCCCAAACTGTC 334423 Query 37006 TTATATATTTGTTTTATATTATCTGGTAAATCT-----AAATGTTGAATAGAACCATTAT 37060 || || || | || || | | ||| ||| | || | |||||| || || || | Sbjct 334422 TTGTAGATATCCTTGATTTCTTGTGG--AATGTTAGGCAAGTTTTGAATCGACCCGTTGT 334365 Query 37061 GTAACACAATTGTATTCTTTATGTCATTATTCCACATATTTC-TACTTATTAGTTCTCTC 37119 | | ||| ||||| ||| || ||||| | || | || | | |||||| Sbjct 334364 CAGAAATAATGTGGTTCTTCATGGAATCGTTCCATA-ATCCCATATCAACCAAGTCTCTC 334306 Query 37120 AATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTG 37179 || | || || || |||| ||| || || || | ||| |||||||| | ||| ||||| Sbjct 334305 AACATGTAAGGGTTAACAATCTGGAACTCACCGGCTAAAACTCTTCTGGAATAAATATTA 334246 Query 37180 CTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGC 37239 || |||||||||| | ||||| | || || |||||||| || || ||||| ||| Sbjct 334245 GAGGTGTATGGTTCAAAACATTCATTGTAACCCAAAATTTGAGAAGTGGAGGCAGTTGGC 334186 Query 37240 ATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCA 37299 |||||||| | || | |||||||| ||| | ||| | | |||| | || Sbjct 334185 ATTGGTGCAACTAATAAAGAGTTTCTCAAACCAAACTTGGAAATCTTTTCCTTTAATCCA 334126 Query 37300 TTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACCTTTA 37359 | |||||||||||| || ||||| ||||| ||||| |||| |||||| | ||||| | Sbjct 334125 TCCCAATCCCATAAGTCGGTTGGCTTCTTACCCCACAAATCAAATTGTAATAAACCTTGA 334066 Query 37360 CTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTA 37419 || |||||||| | | || || ||||| || |||| || ||| || || || |||| Sbjct 334065 CTTGCTGGAGAGCCTTCGTAGGTTTCATATGGACCGTCAACTTTGGCCAGCTCAATACTA 334006 Query 37420 GATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCT 37479 | ||| | || || | ||||| ||||| ||||||||||| |||| | | | || | Sbjct 334005 GCTTCCAATGAAGCGTGGTATATAGTTTCAAAAATTTGTATGTTTAGTTCTCTAGCCTGG 333946 Query 37480 TCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATA 37539 | ||| |||| | | || | || || ||||||| ||||| ||||| || | | Sbjct 333945 GCAGAATCAAATGGCAATCTTAACATCATGAAGGCATCAGCTAAACCTTGAACCCCAACA 333886 Query 37540 CCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAATTGATA 37599 | || ||||| | | || | || ||||| | |||| || |||||||| || | Sbjct 333885 GCAATTGGTCTGTTTCTCATGTTGGATCTTCTAGCTTCTTCAACCGGATAATAGTTTCTG 333826 Query 37600 TCTATTATTTTATTTAGATTTTT------AACTA--GTATTTTC--GTAATTATTCTCAA 37649 || || || ||||| | ||| || |||| || |||| |||||| |||||| Sbjct 333825 TCGATGATCTTATTCAAATTCTTGGCAACAACTTTGGTTATTTCATGTAATT--TCTCAA 333768 Query 37650 C-TTGTCGAAC-ATAAATA--CGTTATTATTAACAAATTTACTCAACGAAATAGATCCTA 37705 || | || || | | | | | | | ||||||| || | || ||| ||| Sbjct 333767 AGTTATACCACGATGAGTTTTCATCACTTTCAACAAATGCTGGTAATGCAACTGATGCTA 333708 Query 37706 GATTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTACAGAGATTAC 37765 ||||| ||||||||||| ||| | | ||| | |||||| ||| |||||| Sbjct 333707 AGTTACAAACAGCAACTTCTTCTGGGGAAGAGTATTCAACAATCTCACAACACAGATTAG 333648 Query 37766 TCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATA 37825 ||| | || | ||||| || ||| |||||||| | || || | ||| ||||| | Sbjct 333647 AAGATTTGATCATACCCAAGTTCTGTTGGTTGGATTTCCTGTTGCATGCATCCTTATAAA 333588 Query 37826 GTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTTG 37885 | || | || || || |||| | || || || | |||||| | |||||| || | Sbjct 333587 GCATGAATGGTGTACCGGTTTCTGTCTGTGCTTCCAAAATAGAGTACCATAATTTTTGAG 333528 Query 37886 CTTTAACGATCGCTTTAAttttt--ttCTTTGTTTCGTATTCTATATATAATTTGTTAAA 37943 | || | | | | | || | | |||||| ||| |||| | ||||||| | || Sbjct 333527 CCTTGATGGTGGATCTACCTCTACCTTCTTT--TTCATATTTTTCGTATAATTCTTCGAA 333470 Query 37944 ATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTC 38003 |||| || | ||||| | || ||||| ||| | ||| | | |||| |||||| Sbjct 333469 TTCATCACCATAAACATCACTCAAACCTGGGGCTTCACTTGGTGAAAAAAGAGTCCATTC 333410 Query 38004 TTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATC 38063 || || ||||| || | | ||| |||||||||| | ||||||||||| || ||||| Sbjct 333409 TTGATTGTTTTCAACTCTCTTCATGAATAAATCAGAAATCCATAATGCAGGGAACAAATC 333350 Query 38064 TTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATC 38123 | | | ||| |||||| || || || ||||| | | | ||| || || ||||| Sbjct 333349 TCTTGCTCTGATTTCTTCCTTACCATGGTTTTTTCTAATGTCAATAAAGTCTAAAATATC 333290 Query 38124 AGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATT 38183 ||||||||||| || | ||| | | | || || |||||||| | ||| || |||| Sbjct 333289 TGCGTGCCATGGCTCGAGATATAAAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATC 333230 Query 38184 AATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCC 38243 | ||||||| | || || ||| | | ||| | ||| || | ||||| || ||| | || Sbjct 333229 GACATATCTAGCGGTATTGTTAAACACTCTAACCATTGGAATGATACCGTTGGATGTACC 333170 Query 38244 GTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCC 38303 ||| |||| | ||||||| ||| | | || ||||| || || || || || Sbjct 333169 GTTGGTACCTGCAATATAAGAACCGGTCGATCTAATATTGTGAATGTGTAAACCAATACC 333110 Query 38304 ACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACT 38363 ||| ||| || || || | ||| ||||||||||| |||||| | |||||||| ||| Sbjct 333109 ACCAGCAGTCTTGGAAATCAGAGCACATTGTTTTAAGGTATCATAAATACCTTCAATAGA 333050 Query 38364 GTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTT 38423 ||||| | || | | || |||||| |||||||||| ||| || || || || Sbjct 333049 ATCATCTTGCATAGCAACTAAGAAACAAGAAGACATTTGATTTCTTGGGGTACCAGCATT 332990 Query 38424 AAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTAT 38483 ||| || || ||||| ||||| | || || ||| |||| |||||| ||||| || Sbjct 332989 AAACAAAGTTGGAGAAGCATGGGTAAAGTATCTTTTAGACATTAGATTATAGGTTTCAAT 332930 Query 38484 TACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGG 38543 || | ||||||| | || |||||||| | || || ||||| | || ||| || || Sbjct 332929 AGCACTTTGTATATCATCACCATGAATACCAACAGCAACTCTCATAATCAAATGCTGAGG 332870 Query 38544 TCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCC 38603 ||||||| |||| | |||| | | | | ||| ||| |||| || ||||| | || Sbjct 332869 TCTTTCTGCAATTTGACCATTCAATCTCAACAAATAAGATCTTTCCAACGTTTTGAAACC 332810 Query 38604 AAAATAACTATA--TGAATAATCTCTATCGTA 38633 |||||| | || ||| |||||||||| || Sbjct 332809 AAAATAGTTGTAGTTGA--AATCTCTATCATA 332780 >seq5 Length=831479 Score = 196 bits (216), Expect = 5e-45 Identities = 399/585 (68%), Gaps = 12/585 (2%) Strand=Plus/Minus Query 11626 TAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGT 11685 |||||| |||||||| ||||||||||| ||||| | |||| ||| || |||||||| Sbjct 304996 TAAACAAGCAAAATCGGTGTGTAAACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGT 304937 Query 11686 TAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAA 11745 || || |||||||| |||| |||||| | ||| || || | |||||| || || || || Sbjct 304936 CAAACCTGGCATCAAACCTCTTTTTTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAA 304877 Query 11746 GAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCC--ATATACCTTGTTGCTA 11803 || || || || ||||| ||||| || |||| |||||| || ||| | | || | Sbjct 304876 AAAGATACCTTCAACAGCGGCAAAGGCAACTAATCTTTCACCGAATAATGCATTTTCATC 304817 Query 11804 G-ATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGC 11862 | | |||||| | ||||||| || || || | ||| | ||| || |||| || || Sbjct 304816 GCACATCCATCTCATGGCCCAGTCGGCCTTTTCTTTAATACATGGAATGTTTTCAATGGC 304757 Query 11863 GTTAAATAAATGCATT--TTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTA 11920 || ||||| | ||| ||| | ||| | ||||| || || || ||||| Sbjct 304756 ATTGAATAA--GAATTCCGATTCCTTTGGATCCTTGACATAGGTGTCAATCAATAAGGAG 304699 Query 11921 TACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCT 11980 || |||| ||||| || |||||||| ||||| || ||||||||||| || || Sbjct 304698 TATGTTTCCGAATGGATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCA 304639 Query 11981 GAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTA 12040 | || || || | | || |||| | ||||| || || ||||||||||| | Sbjct 304638 GGGATTTGCACCTCAGCCGAGAAGTTTTCAACCAAATTTTCGTTGACAATACCATCTGAA 304579 Query 12041 GATGCAAAAAATGCTAGTA-TATGTTTTATAAAGTATTTTTCGTCTTTAGTTAAT---TT 12096 | |||||||| || | | | || | || || || |||||| | | ||| | || Sbjct 304578 GCAGCAAAAAAGGCCAACACTCTG-GTAATGAAAAATCTTTCGTTATCATTTAGTCTGTT 304520 Query 12097 ATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCAC 12156 | ||| || | ||| || || || || || | |||||| ||||||| ||| || | Sbjct 304519 GTTCCAGTCGTGTAAGTCCTTAGACAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTC 304460 Query 12157 TGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAA 12201 | | ||| ||||||| |||||| ||||| || || || ||||| Sbjct 304459 GGCCTTTTTGTACATTTGCCAGATTTCATGGTATTTGATTGGGAA 304415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524583307280