Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq4 452 5e-122
seq5 246 4e-60
>seq4
Length=942658
Score = 452 bits (500), Expect = 5e-122
Identities = 1380/2127 (65%), Gaps = 29/2127 (1%)
Strand=Plus/Minus
Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898
||||||||||||| ||||| || | || || | | || ||||| || || || |
Sbjct 334632 GTGAATTGAATGGCAGCGGCAGCAGCTTGAGTTCTCAAGTAATACATACCAGTCTTCAAT 334573
Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCTGCTAT 64957
|| ||||||| || |||||||| || ||||| || || ||| ||
Sbjct 334572 CCCTTCTTCCATCCATAGAAATGCATCGATGTCAGTTTACCCATGGTAGGGTTCTT-TAG 334514
Query 64958 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 65017
|| || |||||| |||| |||||| ||| |||| || ||||| |||||||| | ||
Sbjct 334513 GTGAATGTTCATACTTTGAGATTGATCAATGTAGGCACCTCTGTCGGCAGCCATATCGAT 334454
Query 65018 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 65077
|| | |||||| | |||||||||| || || || | ||| || |||| |||||
Sbjct 334453 AATAGACTTTTGCGAGATTTCCCAAACTGTCTTGTAGATATCCTTGATTTCTTGTGGAAT 334394
Query 65078 GTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATT 65134
||| | || ||||| || || || | ||||| ||||| || ||| ||
Sbjct 334393 GTTAGGCAAGTTTTGAATCGACCCGTTGTCAGAAATAATGTGGTTCTTCATGGAATCGTT 334334
Query 65135 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 65194
||||||| | || || |||| | | | || ||||| | || || || ||
Sbjct 334333 CCATAATCCCATATCAACCAAGTCTCTCAACATGTAAGGGTTAACAATCTGGAACTCACC 334274
Query 65195 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCC 65254
| || ||||| | | ||||||||| ||| || ||||| | | | ||||| | ||
Sbjct 334273 GGCTAAAACTCTTCTGGAATAAATATTAGAGGTGTATGGTTCAAAACATTCATTGTAACC 334214
Query 65255 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 65314
||||||||||| ||| || ||||| ||||| ||||| || |||||| ||||| | |||
Sbjct 334213 CAAAATTTGAGAAGTGGAGGCAGTTGGCATTGGTGCAACTAATAAAGAGTTTCTCAAACC 334154
Query 65315 GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG--TACAACN 65372
| | || || || |||| ||||||| ||| | || | || | ||
Sbjct 334153 AAACTTGGAAATCTTTTCCTTTAATCCATCCCAATCCCATAAGTCGGTTGGCTTCTTACC 334094
Query 65373 NNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTAT 65432
||||| | ||| | ||| || || ||| | || || || |||
Sbjct 334093 CCACAAATCAAA--TTGTAATAAACCTTGACTTGCTGGAGAGCCTTCGTAGGTTTCATAT 334036
Query 65433 GGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCG 65492
|| || || | || || ||| ||| || || |||| | ||| || || |||||
Sbjct 334035 GGACCGTCAACTTTGGCCAGCTCAATACTAGCTTCCAATGAAGCGTGGTATATAGTTTCA 333976
Query 65493 AAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCT--ATCAAATGGATAATTTAAGAGAA 65550
|| || | | ||||| ||| || | ||| ||||||||| | |||| | |
Sbjct 333975 AAAATTTGTATGTTTAGTTCTCTAGCCTG--GGCAGAATCAAATGGCAATCTTAACATCA 333918
Query 65551 TAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGA 65610
| || || || ||||| |||||||| |||| | | || ||||| | |||| | || ||
Sbjct 333917 TGAAGGCATCAGCTAAACCTTGAACCCCAACAGCAATTGGTCTGTTTCTCATGTTGGATC 333858
Query 65611 TTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAA 65670
|| ||||||| || |||||||| || | || || || ||||| | ||| || |||
Sbjct 333857 TTCTAGCTTCTTCAACCGGATAATAGTTTCTGTCGATGATCTTATTCAAATTCTTGGCAA 333798
Query 65671 TTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGC---------TCATCTATTA 65721
|||||| | || | | ||| ||| | | | | | ||||| ||
Sbjct 333797 CAACTTTGGTTATTTCATGTAATTTCTCAAAGTTATACCACGATGAGTTTTCATCACTTT 333738
Query 65722 CAA-ACATGTTC--AATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCG 65778
||| | ||| | |||||||| ||||| | |||||||| || || || | | |
Sbjct 333737 CAACAAATGCTGGTAATGCAACTGATGCTAAGTTACAAACAGCAACTTCTTCTGGGGAAG 333678
Query 65779 CATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGAT 65838
|||| | |||||| || |||||| | | ||||| | || || || ||||| |
Sbjct 333677 AGTATTCAACAATCTCACAACACAGATTAGAAGATTTGATCATACCCAAGTTCTGTTGGT 333618
Query 65839 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAG 65898
| || |||| || |||||||||||||| |||||||| ||||| ||||| |||| |
Sbjct 333617 TGGATTTCCTGTTGCATGCATCCTTATAAAGCATGAATGGTGTACCGGTTTCTGTCTGTG 333558
Query 65899 ATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTC 65958
||| | ||| | | ||| | | ||||||| || | ||| | ||| ||||
Sbjct 333557 CTTCCAAAATAGAGTACCATAATTTTTGAGCCTTGATGGTGGATCTACCTCTACCTTCTT 333498
Query 65959 TTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGAC 66018
|||| ||| | || ||| |||||| || || || |||||| ||| || ||
Sbjct 333497 TTTCATATTTTTCGTATAATTCTTCGAATTCATCACCATAAACATCACTCAAACCTGGGG 333438
Query 66019 ATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGAT 66078
|||| || | | | | ||| ||| | | | |||| ||||| || | ||
Sbjct 333437 CTTCACTTGGTGAAAAAAGAGTCCATTCTTGATTGTTTTCAACTCTCTTCATGAATAAAT 333378
Query 66079 CAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCT 66138
||| |||||| | || || |||||||| | ||| ||| || || || || |
Sbjct 333377 CAGAAATCCATAATGCAGGGAACAAATCTCTTGCTCTGATTTCTTCCTTACCATGGTTTT 333318
Query 66139 TTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAA 66198
|| ||| || | || | | |||||| ||||| || || | |||| || |
Sbjct 333317 TTCTAATGTCAATAAAGTCTAAAATATCTGCGTGCCATGGCTCGAGATATAAAGCAAAGG 333258
Query 66199 CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCA 66258
| ||||| | |||||| || || ||||| | ||||||||||| || ||| | ||||| |
Sbjct 333257 CACCAGGTCTTTTGTTACCACCTTGATCGACATATCTAGCGGTATTGTTAAACACTCTAA 333198
Query 66259 ACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCAC 66318
||||||||| ||||| ||||||||||| ||||| || | ||||| || | | |
Sbjct 333197 CCATTGGAATGATACCGTTGGATGTACCGTTGGTACCTGCAATATAAGAACCGGTCGATC 333138
Query 66319 GAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTT 66378
|||||| ||| || ||| || || || || | || || || | || ||| |||
Sbjct 333137 TAATATTGTGAATGTGTAAACCAATACCACCAGCAGTCTTGGAAATCAGAGCACATTGTT 333078
Query 66379 TTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAG 66438
|||| |||||||| || || || ||| |||||| ||| || || ||||| ||
Sbjct 333077 TTAAGGTATCATAAATACCTTCAATAGAATCATCTTGCATAGCAACTAAGAAACAAGAAG 333018
Query 66439 ACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATT 66498
||||||| | | || || |||||||| || || |||||||| || ||||| ||
Sbjct 333017 ACATTTGATTTCTTGGGGTACCAGCATTAAACAAAGTTGGAGAAGCATGGGTAAAGTATC 332958
Query 66499 TTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTA 66558
||| ||| | |||||| || || |||||||| | |||||| |||||| || |
Sbjct 332957 TTTTAGACATTAGATTATAGGTTTCAATAGCACTTTGTATATCATCACCATGAATACCAA 332898
Query 66559 CTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACA 66618
| || || | ||| | || |||||||||||||| | || | || | | ||||||
Sbjct 332897 CAGCAACTCTCATAATCAAATGCTGAGGTCTTTCTGCAATTTGACCATTCAATCTCAACA 332838
Query 66619 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTA 66676
| || ||| ||||||| ||||| ||||||||||||||||| ||||| |||| || ||
Sbjct 332837 AATAAGATCTTTCCAACGTTTTGAAACCAAAATAGTTGTAGTTGAAA--TCTCTATCATA 332780
Query 66677 AATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTTGA 66736
| |||| | || || ||| || ||| | || | ||| ||| | ||
Sbjct 332779 ATGAATAGCGTCGTCAAGAACATCAGCATTTTTTTGGACAATTTCCCAGGTGTCATCGGA 332720
Query 66737 AATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCAC 66796
||| || ||||| ||||| || || || |||| |||||| ||| | || | || | |||
Sbjct 332719 AATCATTGGAGAGTGTTTACCGTTCTTTGGATCGACATATTTGTACAATTGGTCAACCAC 332660
Query 66797 TTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAT 66856
||| ||| |||| | |||| ||| || | || || | || | ||| || || |
Sbjct 332659 TTCGGAGAATTTTTTTGTGGTTTGTTTTTGCAAGTTAGAAATCGCCACTCTTGCTGCCAA 332600
Query 66857 AATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTC 66916
|| || ||||| ||||| || || | ||||| |||| ||||| | | ||
Sbjct 332599 AACTGCGTAATCTGGATGGATGGTGGTCATATATGCTGCAGTTTCTGCTGCTAAGTTATC 332540
Query 66917 CAATTCTACCGTTGTTACTCCATTATA 66943
||| || ||||| | || |||| |||
Sbjct 332539 CAACTCCACCGTGGAAACACCATCATA 332513
>seq5
Length=831479
Score = 246 bits (272), Expect = 4e-60
Identities = 599/892 (67%), Gaps = 28/892 (3%)
Strand=Plus/Minus
Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926
|||||||| || || | ||||| || || || || ||||| |||| || || |||
Sbjct 305283 TTTTGGTAATCGGAGACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTT 305224
Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATC 35986
||||||||||| || ||||| | || || || | || | | | || | ||||| |
Sbjct 305223 TCCATGAAATCAAAAGGATTTGTGACGTTGTATCTCTTGTCACAACCAAG---AGAAA-C 305168
Query 35987 AA----TCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA- 36041
|| ||| || || |||||||| | |||| ||||| || ||||| || |
Sbjct 305167 AAGAAGTCTGTCGGCAACAAATTCGACATATTGACACATCAAATCTTTGTTCATACCAAG 305108
Query 36042 TAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTA 36101
|||||| |||||||||| | || | | || ||||||||| || || ||| |
Sbjct 305107 TAAGTTGG-CTGGAAGAGCGTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTTCGA 305049
Query 36102 TAATAGATATTACTGTTTCTTCACTCGGTGG-ATACAATAAATGTTTAAACATCAAACAT 36160
| || | || | | | | || | || || ||||| || | |||||
Sbjct 305048 TGATCTTGAGCACGATCT-TGGAATCTGGGGTATTGTTCAAATGGGAGAATAATAAACAA 304990
Query 36161 GCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCG 36220
|| |||||| ||||| ||| || ||||| | |||||||||||||||||| || | ||
Sbjct 304989 GCAAAATCGGTGTGTAAACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAACCT 304930
Query 36221 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATT 36280
||||| | || | ||||| | ||| || ||||| ||||| ||||| || || || ||
Sbjct 304929 GGCATCAAACCTCTTTTTTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAGATA 304870
Query 36281 CCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCACTGTCAT---GTA 36335
||||| || || |||||||||| | ||| || || |||| ||| | |||| |
Sbjct 304869 CCTTCAACAGCGGCAAAGGCAACTAATCTTTCACCGAATAA--TGCATTTTCATCGCACA 304812
Query 36336 TCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 36394
|||| || || ||||| |||||||| | ||| | ||| || || | || || |||||
Sbjct 304811 TCCATCTCATG-GCCCAGTCGGCCTTTTCTTTAATACATGGAATGTTTTCAATGGCATTG 304753
Query 36395 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCA--AAAGACTATACA 36452
|| | | | ||| || ||| || ||||| || ||||||| || || |||
Sbjct 304752 AATAAGAATTCCGATTCCTTTGGATCCTTGACATAGGTGTCAATCAATAAGGAGTAT--G 304695
Query 36453 TTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAA 36512
|||||||||| |||||||| || ||||| || || |||||||| | || || | |
Sbjct 304694 TTTCCGAATGGATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCAGGGA 304635
Query 36513 TCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 36572
| || || || | | || ||| | |||||||| || || || || || || |
Sbjct 304634 TTTGCACCTCAGCCGAGAAGTTTTCAACCAAATTTTCGTTGACAATACCATCTGAAGCAG 304575
Query 36573 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGT---TTATTCC 36629
||||||| ||||| || | || ||| || ||||||| ||||| || ||||
Sbjct 304574 CAAAAAAGGCCAACACTCTGGTAATGAAAAATCTTTCGTTATCATTTAGTCTGTTGTTCC 304515
Query 36630 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 36689
| || | | || ||||| | || | |||||| | ||||| || || || || ||||
Sbjct 304514 AGTCGTGTAAGTCCTTAGACAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGGCCT 304455
Query 36690 TTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 36741
|||| ||||| | |||||| ||||| |||| ||||| || | ||||||||
Sbjct 304454 TTTTGTACATTTGCCAGATTTCATGGTATTTGATTGGGAAGAGCACAAATCT 304403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172495595080
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