Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq4 489 2e-133
seq5 257 2e-63
>seq4
Length=942658
Score = 489 bits (542), Expect = 2e-133
Identities = 1391/2127 (65%), Gaps = 29/2127 (1%)
Strand=Plus/Minus
Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777
||||||||||||| ||||| || | || || | | || ||||| || || || |
Sbjct 334632 GTGAATTGAATGGCAGCGGCAGCAGCTTGAGTTCTCAAGTAATACATACCAGTCTTCAAT 334573
Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCTGCTAT 78836
|| ||||||| ||||||||||| || ||||| || || ||| ||
Sbjct 334572 CCCTTCTTCCATCCATAGAAATGCATCGATGTCAGTTTACCCATGGTAGGGTTCTT-TAG 334514
Query 78837 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 78896
|| || |||||| |||| |||||| ||| |||| || ||||| |||||||| | ||
Sbjct 334513 GTGAATGTTCATACTTTGAGATTGATCAATGTAGGCACCTCTGTCGGCAGCCATATCGAT 334454
Query 78897 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 78956
|| | |||||| | |||||||||| || || || | ||| || |||| |||||
Sbjct 334453 AATAGACTTTTGCGAGATTTCCCAAACTGTCTTGTAGATATCCTTGATTTCTTGTGGAAT 334394
Query 78957 GTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATT 79013
||| | || ||||| || || || | ||||| ||||| || || ||
Sbjct 334393 GTTAGGCAAGTTTTGAATCGACCCGTTGTCAGAAATAATGTGGTTCTTCATGGAATCGTT 334334
Query 79014 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 79073
||||||| | || || |||| | | | || ||||| | || || || ||
Sbjct 334333 CCATAATCCCATATCAACCAAGTCTCTCAACATGTAAGGGTTAACAATCTGGAACTCACC 334274
Query 79074 AGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCC 79133
| || ||||| | | ||||||||| ||| |||||||| | ||||||| | ||
Sbjct 334273 GGCTAAAACTCTTCTGGAATAAATATTAGAGGTGTATGGTTCAAAACATTCATTGTAACC 334214
Query 79134 CAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 79193
||||||||||| ||| || || |||||||| ||||| || |||||| ||||| | |||
Sbjct 334213 CAAAATTTGAGAAGTGGAGGCAGTTGGCATTGGTGCAACTAATAAAGAGTTTCTCAAACC 334154
Query 79194 GTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATT 79253
| || || || |||| ||||||||||| | || | || |
Sbjct 334153 AAACTTGGAAATCTTTTCCTTTAATCCATCCCAATCCCATAAGTCGGTTGGCTTCTTACC 334094
Query 79254 CCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGG 79313
||| | |||| |||||| | ||| | ||| || || ||| ||| |||||||| ||
Sbjct 334093 CCACAAATCAAATTGTAATAAACCTTGACTTGCTGGAGAGCCTTCGTAGGTTTCATATGG 334034
Query 79314 TCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAA 79373
|| || || ||| | ||| ||| || || |||| ||| || || ||||| ||
Sbjct 334033 ACCGTCAACTTTGGCCAGCTCAATACTAGCTTCCAATGAAGCGTGGTATATAGTTTCAAA 333974
Query 79374 AATCTTCTTATTGAGATCTTGTGCTTCTAGGCT--ATCAAATGGATAATTTAAGAGAATA 79431
||| | | || || ||| || || ||| ||||||||| | |||| | ||
Sbjct 333973 AATTTGTATGTTTAGTTCTCTAGC--CTGGGCAGAATCAAATGGCAATCTTAACATCATG 333916
Query 79432 AACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATT 79491
|| || || ||||| |||||||| |||| | | || ||||| | |||| | || || ||
Sbjct 333915 AAGGCATCAGCTAAACCTTGAACCCCAACAGCAATTGGTCTGTTTCTCATGTTGGATCTT 333856
Query 79492 TCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATT 79551
||||||| || |||||||| || | || || || ||||| | |||| || | |
Sbjct 333855 CTAGCTTCTTCAACCGGATAATAGTTTCTGTCGATGATCTTATTCAAATTCTTGGCAACA 333796
Query 79552 ACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCG---------TCCATCTATTACA 79602
|||||| | || | || ||| ||| | | | | | |||| || ||
Sbjct 333795 ACTTTGGTTATTTCATGTAATTTCTCAAAGTTATACCACGATGAGTTTTCATCACTTTCA 333736
Query 79603 A-ACATGTTC--AACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA 79659
| | ||| | || || || ||||| | |||||||| || || || | | |
Sbjct 333735 ACAAATGCTGGTAATGCAACTGATGCTAAGTTACAAACAGCAACTTCTTCTGGGGAAGAG 333676
Query 79660 TATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTA 79719
|||| | || ||| || || ||| | | || || | || || || ||||| ||
Sbjct 333675 TATTCAACAATCTCACAACACAGATTAGAAGATTTGATCATACCCAAGTTCTGTTGGTTG 333616
Query 79720 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGAT 79779
|| |||| || |||||||||||||| ||||| || ||||| ||||| |||| | |
Sbjct 333615 GATTTCCTGTTGCATGCATCCTTATAAAGCATGAATGGTGTACCGGTTTCTGTCTGTGCT 333556
Query 79780 TCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTT--TTCTC 79837
|| | ||| | | ||| | | ||||||| || | || | || |||| ||||
Sbjct 333555 TCCAAAATAGAGTACCATAATTTTTGAGCCTTGATGGTGGA--TCTACCTCTACCTTCTT 333498
Query 79838 TTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGAC 79897
|||| |||| | |||||| |||||| || || || ||||||| || || ||
Sbjct 333497 TTTCATATTTTTCGTATAATTCTTCGAATTCATCACCATAAACATCACTCAAACCTGGGG 333438
Query 79898 ATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGAT 79957
||| || | | | | ||| ||| || | | |||| ||||| || | ||
Sbjct 333437 CTTCACTTGGTGAAAAAAGAGTCCATTCTTGATTGTTTTCAACTCTCTTCATGAATAAAT 333378
Query 79958 CAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCT 80017
||| |||||| | || || | |||||| | ||| || || || || || |
Sbjct 333377 CAGAAATCCATAATGCAGGGAACAAATCTCTTGCTCTGATTTCTTCCTTACCATGGTTTT 333318
Query 80018 TTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA 80077
|| ||| || | || | | |||||| | ||||| || || | |||| || |
Sbjct 333317 TTCTAATGTCAATAAAGTCTAAAATATCTGCGTGCCATGGCTCGAGATATAAAGCAAAGG 333258
Query 80078 CTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCA 80137
| || |||| |||||| || || ||||| | ||||||||||| || ||| | ||||| |
Sbjct 333257 CACCAGGTCTTTTGTTACCACCTTGATCGACATATCTAGCGGTATTGTTAAACACTCTAA 333198
Query 80138 ACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCAC 80197
||||||||| ||||| ||||||||||| ||||| || | ||||| || | | |
Sbjct 333197 CCATTGGAATGATACCGTTGGATGTACCGTTGGTACCTGCAATATAAGAACCGGTCGATC 333138
Query 80198 GAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTT 80257
|||||| ||| || ||| || || || || | || || || | || ||| |||
Sbjct 333137 TAATATTGTGAATGTGTAAACCAATACCACCAGCAGTCTTGGAAATCAGAGCACATTGTT 333078
Query 80258 TTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAG 80317
|||| |||||||| || || || || |||||| ||| || || ||||| ||
Sbjct 333077 TTAAGGTATCATAAATACCTTCAATAGAATCATCTTGCATAGCAACTAAGAAACAAGAAG 333018
Query 80318 ACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATT 80377
||||||| | | || || |||||||| || || |||||||| || ||||| ||
Sbjct 333017 ACATTTGATTTCTTGGGGTACCAGCATTAAACAAAGTTGGAGAAGCATGGGTAAAGTATC 332958
Query 80378 TTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTA 80437
||| ||||| |||||| || || |||||||| || |||||| |||||| || |
Sbjct 332957 TTTTAGACATTAGATTATAGGTTTCAATAGCACTTTGTATATCATCACCATGAATACCAA 332898
Query 80438 CCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACA 80497
| || || | ||| | || |||||||||||||| | || | ||| | | ||||||
Sbjct 332897 CAGCAACTCTCATAATCAAATGCTGAGGTCTTTCTGCAATTTGACCATTCAATCTCAACA 332838
Query 80498 AGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTA 80555
| |||||| ||||||| ||||| ||||||||||||||||| ||||| |||| || ||
Sbjct 332837 AATAAGATCTTTCCAACGTTTTGAAACCAAAATAGTTGTAGTTGAAA--TCTCTATCATA 332780
Query 80556 AATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGATACTTGA 80615
| |||| | || || ||| || ||| | || | ||| |||| | ||
Sbjct 332779 ATGAATAGCGTCGTCAAGAACATCAGCATTTTTTTGGACAATTTCCCAGGTGTCATCGGA 332720
Query 80616 AATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCAC 80675
||| || ||||| ||||| || || || |||| ||||| ||| | || | || | |||
Sbjct 332719 AATCATTGGAGAGTGTTTACCGTTCTTTGGATCGACATATTTGTACAATTGGTCAACCAC 332660
Query 80676 TTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAA 80735
||| ||| |||| | |||| || || | || || | || | ||| || || ||
Sbjct 332659 TTCGGAGAATTTTTTTGTGGTTTGTTTTTGCAAGTTAGAAATCGCCACTCTTGCTGCCAA 332600
Query 80736 AATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTC 80795
|| || ||||||||||| || || | ||||| |||| ||||| | | ||
Sbjct 332599 AACTGCGTAATCTGGATGGATGGTGGTCATATATGCTGCAGTTTCTGCTGCTAAGTTATC 332540
Query 80796 CAATTCTACCGTTGTTACTCCATTATA 80822
||| || ||||| | || |||| |||
Sbjct 332539 CAACTCCACCGTGGAAACACCATCATA 332513
>seq5
Length=831479
Score = 257 bits (284), Expect = 2e-63
Identities = 604/894 (68%), Gaps = 32/894 (4%)
Strand=Plus/Minus
Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728
|||||||| || || | ||||| || || || || || || | || || || |||
Sbjct 305283 TTTTGGTAATCGGAGACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTT 305224
Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788
|||||||||||||| ||||| || || || || | || | | | || | ||||| |
Sbjct 305223 TCCATGAAATCAAAAGGATTTGTGACGTTGTATCTCTTGTCACAACCAAG---AGAAA-C 305168
Query 49789 AA----TCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA- 49843
|| ||| || || |||||||| | |||| ||||| || ||||| || |
Sbjct 305167 AAGAAGTCTGTCGGCAACAAATTCGACATATTGACACATCAAATCTTTGTTCATACCAAG 305108
Query 49844 TAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTA 49903
|||||| |||||||||| | || | | || ||||||||| || || ||| |
Sbjct 305107 TAAGTTGG-CTGGAAGAGCGTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTTCGA 305049
Query 49904 TAATA--GATCTAACGGTTTCTTCACTCGGTGG-ATGCAATAAATGTTTAAACATCAAAC 49960
| || || | ||| | | | | || | || || ||||| || | ||||
Sbjct 305048 TGATCTTGAGC--ACGATCT-TGGAATCTGGGGTATTGTTCAAATGGGAGAATAATAAAC 304992
Query 49961 ATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTC 50020
| || |||||| ||| | ||| || ||||| | ||||| |||||||||||| || | |
Sbjct 304991 AAGCAAAATCGGTGTGTAAACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAAC 304932
Query 50021 CGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGA 50080
| ||||| | || | ||||| | ||| || ||||| ||||| || || || || ||||
Sbjct 304931 CTGGCATCAAACCTCTTTTTTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAGA 304872
Query 50081 TTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCC--ATAACTGGCGCTGTCAT---G 50135
| ||||| || |||||||||||||| | ||| || || |||| || | ||||
Sbjct 304871 TACCTTCAACAGCGGCAAAGGCAACTAATCTTTCACCGAATAA--TGCATTTTCATCGCA 304814
Query 50136 TATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 50194
||||| || || ||||| |||||||| | ||| | ||| || || |||| |||||||
Sbjct 304813 CATCCATCTCATG-GCCCAGTCGGCCTTTTCTTTAATACATGGAATGTTTTCAATGGCAT 304755
Query 50195 TAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCA--AAAGACTATA 50252
| || | | | ||| || ||| || ||||| || || |||| || || |||
Sbjct 304754 TGAATAAGAATTCCGATTCCTTTGGATCCTTGACATAGGTGTCAATCAATAAGGAGTAT- 304696
Query 50253 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 50312
|||||||||| |||||||| || || || || || |||||||| | || || |
Sbjct 304695 -GTTTCCGAATGGATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCAGG 304637
Query 50313 AATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGC 50372
|| ||||| || | | || |||| | |||||||| || || || || || ||
Sbjct 304636 GATTTGCACCTCAGCCGAGAAGTTTTCAACCAAATTTTCGTTGACAATACCATCTGAAGC 304577
Query 50373 TGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGT---TTATT 50429
|||||||| ||||| || | || ||| | ||||||| ||||| || ||
Sbjct 304576 AGCAAAAAAGGCCAACACTCTGGTAATGAAAAATCTTTCGTTATCATTTAGTCTGTTGTT 304517
Query 50430 CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGC 50489
||| || | | || ||||| | || | |||||| | ||||| || || || || ||
Sbjct 304516 CCAGTCGTGTAAGTCCTTAGACAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGGC 304457
Query 50490 CTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 50543
|||||| ||||| | |||||| ||||| |||| ||||||||| | ||||||||
Sbjct 304456 CTTTTTGTACATTTGCCAGATTTCATGGTATTTGATTGGGAAGAGCACAAATCT 304403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268467800680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |