Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq4 489 2e-133 seq5 257 2e-63 >seq4 Length=942658 Score = 489 bits (542), Expect = 2e-133 Identities = 1391/2127 (65%), Gaps = 29/2127 (1%) Strand=Plus/Minus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||||||||||| ||||| || | || || | | || ||||| || || || | Sbjct 334632 GTGAATTGAATGGCAGCGGCAGCAGCTTGAGTTCTCAAGTAATACATACCAGTCTTCAAT 334573 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCTGCTAT 78836 || ||||||| ||||||||||| || ||||| || || ||| || Sbjct 334572 CCCTTCTTCCATCCATAGAAATGCATCGATGTCAGTTTACCCATGGTAGGGTTCTT-TAG 334514 Query 78837 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 78896 || || |||||| |||| |||||| ||| |||| || ||||| |||||||| | || Sbjct 334513 GTGAATGTTCATACTTTGAGATTGATCAATGTAGGCACCTCTGTCGGCAGCCATATCGAT 334454 Query 78897 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 78956 || | |||||| | |||||||||| || || || | ||| || |||| ||||| Sbjct 334453 AATAGACTTTTGCGAGATTTCCCAAACTGTCTTGTAGATATCCTTGATTTCTTGTGGAAT 334394 Query 78957 GTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATT 79013 ||| | || ||||| || || || | ||||| ||||| || || || Sbjct 334393 GTTAGGCAAGTTTTGAATCGACCCGTTGTCAGAAATAATGTGGTTCTTCATGGAATCGTT 334334 Query 79014 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 79073 ||||||| | || || |||| | | | || ||||| | || || || || Sbjct 334333 CCATAATCCCATATCAACCAAGTCTCTCAACATGTAAGGGTTAACAATCTGGAACTCACC 334274 Query 79074 AGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCC 79133 | || ||||| | | ||||||||| ||| |||||||| | ||||||| | || Sbjct 334273 GGCTAAAACTCTTCTGGAATAAATATTAGAGGTGTATGGTTCAAAACATTCATTGTAACC 334214 Query 79134 CAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 79193 ||||||||||| ||| || || |||||||| ||||| || |||||| ||||| | ||| Sbjct 334213 CAAAATTTGAGAAGTGGAGGCAGTTGGCATTGGTGCAACTAATAAAGAGTTTCTCAAACC 334154 Query 79194 GTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATT 79253 | || || || |||| ||||||||||| | || | || | Sbjct 334153 AAACTTGGAAATCTTTTCCTTTAATCCATCCCAATCCCATAAGTCGGTTGGCTTCTTACC 334094 Query 79254 CCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGG 79313 ||| | |||| |||||| | ||| | ||| || || ||| ||| |||||||| || Sbjct 334093 CCACAAATCAAATTGTAATAAACCTTGACTTGCTGGAGAGCCTTCGTAGGTTTCATATGG 334034 Query 79314 TCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAA 79373 || || || ||| | ||| ||| || || |||| ||| || || ||||| || Sbjct 334033 ACCGTCAACTTTGGCCAGCTCAATACTAGCTTCCAATGAAGCGTGGTATATAGTTTCAAA 333974 Query 79374 AATCTTCTTATTGAGATCTTGTGCTTCTAGGCT--ATCAAATGGATAATTTAAGAGAATA 79431 ||| | | || || ||| || || ||| ||||||||| | |||| | || Sbjct 333973 AATTTGTATGTTTAGTTCTCTAGC--CTGGGCAGAATCAAATGGCAATCTTAACATCATG 333916 Query 79432 AACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATT 79491 || || || ||||| |||||||| |||| | | || ||||| | |||| | || || || Sbjct 333915 AAGGCATCAGCTAAACCTTGAACCCCAACAGCAATTGGTCTGTTTCTCATGTTGGATCTT 333856 Query 79492 TCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATT 79551 ||||||| || |||||||| || | || || || ||||| | |||| || | | Sbjct 333855 CTAGCTTCTTCAACCGGATAATAGTTTCTGTCGATGATCTTATTCAAATTCTTGGCAACA 333796 Query 79552 ACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCG---------TCCATCTATTACA 79602 |||||| | || | || ||| ||| | | | | | |||| || || Sbjct 333795 ACTTTGGTTATTTCATGTAATTTCTCAAAGTTATACCACGATGAGTTTTCATCACTTTCA 333736 Query 79603 A-ACATGTTC--AACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA 79659 | | ||| | || || || ||||| | |||||||| || || || | | | Sbjct 333735 ACAAATGCTGGTAATGCAACTGATGCTAAGTTACAAACAGCAACTTCTTCTGGGGAAGAG 333676 Query 79660 TATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTA 79719 |||| | || ||| || || ||| | | || || | || || || ||||| || Sbjct 333675 TATTCAACAATCTCACAACACAGATTAGAAGATTTGATCATACCCAAGTTCTGTTGGTTG 333616 Query 79720 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGAT 79779 || |||| || |||||||||||||| ||||| || ||||| ||||| |||| | | Sbjct 333615 GATTTCCTGTTGCATGCATCCTTATAAAGCATGAATGGTGTACCGGTTTCTGTCTGTGCT 333556 Query 79780 TCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTT--TTCTC 79837 || | ||| | | ||| | | ||||||| || | || | || |||| |||| Sbjct 333555 TCCAAAATAGAGTACCATAATTTTTGAGCCTTGATGGTGGA--TCTACCTCTACCTTCTT 333498 Query 79838 TTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGAC 79897 |||| |||| | |||||| |||||| || || || ||||||| || || || Sbjct 333497 TTTCATATTTTTCGTATAATTCTTCGAATTCATCACCATAAACATCACTCAAACCTGGGG 333438 Query 79898 ATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGAT 79957 ||| || | | | | ||| ||| || | | |||| ||||| || | || Sbjct 333437 CTTCACTTGGTGAAAAAAGAGTCCATTCTTGATTGTTTTCAACTCTCTTCATGAATAAAT 333378 Query 79958 CAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCT 80017 ||| |||||| | || || | |||||| | ||| || || || || || | Sbjct 333377 CAGAAATCCATAATGCAGGGAACAAATCTCTTGCTCTGATTTCTTCCTTACCATGGTTTT 333318 Query 80018 TTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA 80077 || ||| || | || | | |||||| | ||||| || || | |||| || | Sbjct 333317 TTCTAATGTCAATAAAGTCTAAAATATCTGCGTGCCATGGCTCGAGATATAAAGCAAAGG 333258 Query 80078 CTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCA 80137 | || |||| |||||| || || ||||| | ||||||||||| || ||| | ||||| | Sbjct 333257 CACCAGGTCTTTTGTTACCACCTTGATCGACATATCTAGCGGTATTGTTAAACACTCTAA 333198 Query 80138 ACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCAC 80197 ||||||||| ||||| ||||||||||| ||||| || | ||||| || | | | Sbjct 333197 CCATTGGAATGATACCGTTGGATGTACCGTTGGTACCTGCAATATAAGAACCGGTCGATC 333138 Query 80198 GAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTT 80257 |||||| ||| || ||| || || || || | || || || | || ||| ||| Sbjct 333137 TAATATTGTGAATGTGTAAACCAATACCACCAGCAGTCTTGGAAATCAGAGCACATTGTT 333078 Query 80258 TTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAG 80317 |||| |||||||| || || || || |||||| ||| || || ||||| || Sbjct 333077 TTAAGGTATCATAAATACCTTCAATAGAATCATCTTGCATAGCAACTAAGAAACAAGAAG 333018 Query 80318 ACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATT 80377 ||||||| | | || || |||||||| || || |||||||| || ||||| || Sbjct 333017 ACATTTGATTTCTTGGGGTACCAGCATTAAACAAAGTTGGAGAAGCATGGGTAAAGTATC 332958 Query 80378 TTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTA 80437 ||| ||||| |||||| || || |||||||| || |||||| |||||| || | Sbjct 332957 TTTTAGACATTAGATTATAGGTTTCAATAGCACTTTGTATATCATCACCATGAATACCAA 332898 Query 80438 CCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACA 80497 | || || | ||| | || |||||||||||||| | || | ||| | | |||||| Sbjct 332897 CAGCAACTCTCATAATCAAATGCTGAGGTCTTTCTGCAATTTGACCATTCAATCTCAACA 332838 Query 80498 AGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTA 80555 | |||||| ||||||| ||||| ||||||||||||||||| ||||| |||| || || Sbjct 332837 AATAAGATCTTTCCAACGTTTTGAAACCAAAATAGTTGTAGTTGAAA--TCTCTATCATA 332780 Query 80556 AATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGATACTTGA 80615 | |||| | || || ||| || ||| | || | ||| |||| | || Sbjct 332779 ATGAATAGCGTCGTCAAGAACATCAGCATTTTTTTGGACAATTTCCCAGGTGTCATCGGA 332720 Query 80616 AATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCAC 80675 ||| || ||||| ||||| || || || |||| ||||| ||| | || | || | ||| Sbjct 332719 AATCATTGGAGAGTGTTTACCGTTCTTTGGATCGACATATTTGTACAATTGGTCAACCAC 332660 Query 80676 TTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAA 80735 ||| ||| |||| | |||| || || | || || | || | ||| || || || Sbjct 332659 TTCGGAGAATTTTTTTGTGGTTTGTTTTTGCAAGTTAGAAATCGCCACTCTTGCTGCCAA 332600 Query 80736 AATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTC 80795 || || ||||||||||| || || | ||||| |||| ||||| | | || Sbjct 332599 AACTGCGTAATCTGGATGGATGGTGGTCATATATGCTGCAGTTTCTGCTGCTAAGTTATC 332540 Query 80796 CAATTCTACCGTTGTTACTCCATTATA 80822 ||| || ||||| | || |||| ||| Sbjct 332539 CAACTCCACCGTGGAAACACCATCATA 332513 >seq5 Length=831479 Score = 257 bits (284), Expect = 2e-63 Identities = 604/894 (68%), Gaps = 32/894 (4%) Strand=Plus/Minus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 |||||||| || || | ||||| || || || || || || | || || || ||| Sbjct 305283 TTTTGGTAATCGGAGACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTT 305224 Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788 |||||||||||||| ||||| || || || || | || | | | || | ||||| | Sbjct 305223 TCCATGAAATCAAAAGGATTTGTGACGTTGTATCTCTTGTCACAACCAAG---AGAAA-C 305168 Query 49789 AA----TCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA- 49843 || ||| || || |||||||| | |||| ||||| || ||||| || | Sbjct 305167 AAGAAGTCTGTCGGCAACAAATTCGACATATTGACACATCAAATCTTTGTTCATACCAAG 305108 Query 49844 TAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTA 49903 |||||| |||||||||| | || | | || ||||||||| || || ||| | Sbjct 305107 TAAGTTGG-CTGGAAGAGCGTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTTCGA 305049 Query 49904 TAATA--GATCTAACGGTTTCTTCACTCGGTGG-ATGCAATAAATGTTTAAACATCAAAC 49960 | || || | ||| | | | | || | || || ||||| || | |||| Sbjct 305048 TGATCTTGAGC--ACGATCT-TGGAATCTGGGGTATTGTTCAAATGGGAGAATAATAAAC 304992 Query 49961 ATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTC 50020 | || |||||| ||| | ||| || ||||| | ||||| |||||||||||| || | | Sbjct 304991 AAGCAAAATCGGTGTGTAAACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAAC 304932 Query 50021 CGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGA 50080 | ||||| | || | ||||| | ||| || ||||| ||||| || || || || |||| Sbjct 304931 CTGGCATCAAACCTCTTTTTTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAGA 304872 Query 50081 TTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCC--ATAACTGGCGCTGTCAT---G 50135 | ||||| || |||||||||||||| | ||| || || |||| || | |||| Sbjct 304871 TACCTTCAACAGCGGCAAAGGCAACTAATCTTTCACCGAATAA--TGCATTTTCATCGCA 304814 Query 50136 TATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 50194 ||||| || || ||||| |||||||| | ||| | ||| || || |||| ||||||| Sbjct 304813 CATCCATCTCATG-GCCCAGTCGGCCTTTTCTTTAATACATGGAATGTTTTCAATGGCAT 304755 Query 50195 TAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCA--AAAGACTATA 50252 | || | | | ||| || ||| || ||||| || || |||| || || ||| Sbjct 304754 TGAATAAGAATTCCGATTCCTTTGGATCCTTGACATAGGTGTCAATCAATAAGGAGTAT- 304696 Query 50253 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 50312 |||||||||| |||||||| || || || || || |||||||| | || || | Sbjct 304695 -GTTTCCGAATGGATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCAGG 304637 Query 50313 AATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGC 50372 || ||||| || | | || |||| | |||||||| || || || || || || Sbjct 304636 GATTTGCACCTCAGCCGAGAAGTTTTCAACCAAATTTTCGTTGACAATACCATCTGAAGC 304577 Query 50373 TGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGT---TTATT 50429 |||||||| ||||| || | || ||| | ||||||| ||||| || || Sbjct 304576 AGCAAAAAAGGCCAACACTCTGGTAATGAAAAATCTTTCGTTATCATTTAGTCTGTTGTT 304517 Query 50430 CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGC 50489 ||| || | | || ||||| | || | |||||| | ||||| || || || || || Sbjct 304516 CCAGTCGTGTAAGTCCTTAGACAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGGC 304457 Query 50490 CTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 50543 |||||| ||||| | |||||| ||||| |||| ||||||||| | |||||||| Sbjct 304456 CTTTTTGTACATTTGCCAGATTTCATGGTATTTGATTGGGAAGAGCACAAATCT 304403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268467800680