Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq5 297 2e-75 >seq5 Length=831479 Score = 297 bits (328), Expect = 2e-75 Identities = 595/873 (68%), Gaps = 17/873 (2%) Strand=Plus/Minus Query 13596 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13655 ||||| |||||||||||||| || ||||| | | || || |||||||| |||||||| Sbjct 305268 ACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTTTCCATGAAATCAAAA 305209 Query 13656 GGATTTATTGACATAAACACT-TTATCACAACCTAGTTCTAATAGTAATCTATCAGCAAT 13714 |||||| | ||| | || || |||||||| || | || | ||| || |||| Sbjct 305208 GGATTTGT-GACGTTGTATCTCTTGTCACAACCAAGAGAAACAAGAAGTCTGTCGGCAAC 305150 Query 13715 AAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTAT 13774 ||| || | ||||||| |||| ||||| |||||||| | || || | |||| Sbjct 305149 AAATTCGACATATTGACACATCAAATCTTTGTTCATACCAAGTAAGTTGGCTGGAAGAGC 305090 Query 13775 ATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATAATTGTAATAATCTC 13834 | || ||| || || ||| || ||||| |||| || || | | |||| Sbjct 305089 GTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTTCGATGATCTTGAGCACGATCT- 305031 Query 13835 ATTAGAA---GGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAG 13891 | ||| || | || || | ||| || | |||||| |||||||| || | Sbjct 305030 --TGGAATCTGGGGTATTGTTCAAATGGGAGAATAATAAACAAGCAAAATCGGTGTGTAA 304973 Query 13892 GCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttt 13951 || |||||||| | ||| | |||||| |||||||| || ||||||||||| |||| ||| Sbjct 304972 ACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAACCTGGCATCAAACCTCTTTT 304913 Query 13952 ttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14011 ||| ||||| || || | |||||| || ||||| || || || || ||||| || ||||| Sbjct 304912 TTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAGATACCTTCAACAGCGGCAAA 304853 Query 14012 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14071 || | ||||| ||| || || |||| |||| | | |||||| | | ||||| || Sbjct 304852 GGCAACTAATCTTTCACCGAATAATGCATTTTCATCGCACATCCATCTCATGGCCCAGTC 304793 Query 14072 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCC--TTCTCT 14129 | |||| ||||||| | || ||||||| ||||| ||||| ||||| ||| || Sbjct 304792 GGCCTTTTCTTTAATACATGGAATGTTTTCAATGGCATTGAATAAGAATTCCGATTC-CT 304734 Query 14130 TTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTC 14188 || | | ||||| | || || ||||| | |||| || |||| || || |||||||| Sbjct 304733 TTGGATCCTTGACA--TAGGTGTCAATCAATAAGGAGTATGTTTCCGAATGGATGTTTTC 304676 Query 14189 CATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAA 14248 ||| || || |||||||| || || | ||||| | ||| || || | | || Sbjct 304675 CATCATGATTTGGAAACCATAGAAACACTTGGCTTCAGGGATTTGCACCTCAGCCGAGAA 304616 Query 14249 TCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTT 14308 |||| |||||||||| || || |||||||| ||| |||||||| ||||| | | Sbjct 304615 GTTTTCAACCAAATTTTCGTTGACAATACCATCTGAAGCAGCAAAAAAGGCCAACACTCT 304556 Query 14309 TTTAATAAAGTATTGCTCTTCATTGTTGAGT---TTTTTCCAATCGGATAAATCCTTAGA 14365 |||| || || || | || || ||| || ||||| ||| ||| |||||||| Sbjct 304555 GGTAATGAAAAATCTTTCGTTATCATTTAGTCTGTTGTTCCAGTCGTGTAAGTCCTTAGA 304496 Query 14366 AAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATAT 14425 | || | ||| || | ||||| ||| || | || ||||| |||||| ||| || Sbjct 304495 CAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGGCCTTTTTGTACATTTGCCAGAT 304436 Query 14426 TTCTTTATATAATATAGGAAAAACTACAAATCT 14458 ||| | ||| || || || | |||||||| Sbjct 304435 TTCATGGTATTTGATTGGGAAGAGCACAAATCT 304403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727778125800