Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq5 297 2e-75
>seq5
Length=831479
Score = 297 bits (328), Expect = 2e-75
Identities = 595/873 (68%), Gaps = 17/873 (2%)
Strand=Plus/Minus
Query 13596 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13655
||||| |||||||||||||| || ||||| | | || || |||||||| ||||||||
Sbjct 305268 ACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTTTCCATGAAATCAAAA 305209
Query 13656 GGATTTATTGACATAAACACT-TTATCACAACCTAGTTCTAATAGTAATCTATCAGCAAT 13714
|||||| | ||| | || || |||||||| || | || | ||| || ||||
Sbjct 305208 GGATTTGT-GACGTTGTATCTCTTGTCACAACCAAGAGAAACAAGAAGTCTGTCGGCAAC 305150
Query 13715 AAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTAT 13774
||| || | ||||||| |||| ||||| |||||||| | || || | ||||
Sbjct 305149 AAATTCGACATATTGACACATCAAATCTTTGTTCATACCAAGTAAGTTGGCTGGAAGAGC 305090
Query 13775 ATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATAATTGTAATAATCTC 13834
| || ||| || || ||| || ||||| |||| || || | | ||||
Sbjct 305089 GTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTTCGATGATCTTGAGCACGATCT- 305031
Query 13835 ATTAGAA---GGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAG 13891
| ||| || | || || | ||| || | |||||| |||||||| || |
Sbjct 305030 --TGGAATCTGGGGTATTGTTCAAATGGGAGAATAATAAACAAGCAAAATCGGTGTGTAA 304973
Query 13892 GCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttt 13951
|| |||||||| | ||| | |||||| |||||||| || ||||||||||| |||| |||
Sbjct 304972 ACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAACCTGGCATCAAACCTCTTTT 304913
Query 13952 ttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14011
||| ||||| || || | |||||| || ||||| || || || || ||||| || |||||
Sbjct 304912 TTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAGATACCTTCAACAGCGGCAAA 304853
Query 14012 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14071
|| | ||||| ||| || || |||| |||| | | |||||| | | ||||| ||
Sbjct 304852 GGCAACTAATCTTTCACCGAATAATGCATTTTCATCGCACATCCATCTCATGGCCCAGTC 304793
Query 14072 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCC--TTCTCT 14129
| |||| ||||||| | || ||||||| ||||| ||||| ||||| ||| ||
Sbjct 304792 GGCCTTTTCTTTAATACATGGAATGTTTTCAATGGCATTGAATAAGAATTCCGATTC-CT 304734
Query 14130 TTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTC 14188
|| | | ||||| | || || ||||| | |||| || |||| || || ||||||||
Sbjct 304733 TTGGATCCTTGACA--TAGGTGTCAATCAATAAGGAGTATGTTTCCGAATGGATGTTTTC 304676
Query 14189 CATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAA 14248
||| || || |||||||| || || | ||||| | ||| || || | | ||
Sbjct 304675 CATCATGATTTGGAAACCATAGAAACACTTGGCTTCAGGGATTTGCACCTCAGCCGAGAA 304616
Query 14249 TCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTT 14308
|||| |||||||||| || || |||||||| ||| |||||||| ||||| | |
Sbjct 304615 GTTTTCAACCAAATTTTCGTTGACAATACCATCTGAAGCAGCAAAAAAGGCCAACACTCT 304556
Query 14309 TTTAATAAAGTATTGCTCTTCATTGTTGAGT---TTTTTCCAATCGGATAAATCCTTAGA 14365
|||| || || || | || || ||| || ||||| ||| ||| ||||||||
Sbjct 304555 GGTAATGAAAAATCTTTCGTTATCATTTAGTCTGTTGTTCCAGTCGTGTAAGTCCTTAGA 304496
Query 14366 AAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATAT 14425
| || | ||| || | ||||| ||| || | || ||||| |||||| ||| ||
Sbjct 304495 CAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGGCCTTTTTGTACATTTGCCAGAT 304436
Query 14426 TTCTTTATATAATATAGGAAAAACTACAAATCT 14458
||| | ||| || || || | ||||||||
Sbjct 304435 TTCATGGTATTTGATTGGGAAGAGCACAAATCT 304403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479727778125800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |