Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq5 288 9e-73
>seq5
Length=831479
Score = 288 bits (318), Expect = 9e-73
Identities = 596/875 (68%), Gaps = 19/875 (2%)
Strand=Plus/Minus
Query 13384 ACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCGAAT 13443
||||| |||||||| ||||| || ||||| | | || || |||||||| ||||| ||
Sbjct 305268 ACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTTTCCATGAAATCAAAA 305209
Query 13444 GGATTTGTTGACATAAACACT-TTATCACAACCTAGTTCTAATAATAA-TCTATCAGCAA 13501
|||||||| ||| | || || |||||||| || || || || ||| || ||||
Sbjct 305208 GGATTTGT-GACGTTGTATCTCTTGTCACAACCAAGAGA-AACAAGAAGTCTGTCGGCAA 305151
Query 13502 TAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTA 13561
||| || | ||||||| |||| ||||| |||||||| | || || | ||||
Sbjct 305150 CAAATTCGACATATTGACACATCAAATCTTTGTTCATACCAAGTAAGTTGGCTGGAAGAG 305091
Query 13562 TATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCTTAATAATGT 13621
| || ||| || || ||| || ||||| || | || || ||| | | |
Sbjct 305090 CGTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTTCGATGAT---CTTGAGCACGA 305034
Query 13622 CATTAGAA---GGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAA 13678
|| ||| || | || || | ||| || | |||||| |||||||| || |
Sbjct 305033 TCTTGGAATCTGGGGTATTGTTCAAATGGGAGAATAATAAACAAGCAAAATCGGTGTGTA 304974
Query 13679 GGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtt 13738
|| |||||||| | ||| | |||||| |||||||| || ||||||||||| |||| ||
Sbjct 304973 AACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAACCTGGCATCAAACCTCTTT 304914
Query 13739 tttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAA 13798
|||| ||||| || || | ||| || |||||||| || || || || ||||| || ||||
Sbjct 304913 TTTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAGATACCTTCAACAGCGGCAA 304854
Query 13799 ACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATT 13858
| || | || || ||| || || |||| |||| | | |||||| | | ||||| |
Sbjct 304853 AGGCAACTAATCTTTCACCGAATAATGCATTTTCATCGCACATCCATCTCATGGCCCAGT 304794
Query 13859 CAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTCC--TTCTC 13916
| | |||| ||||||| | || |||| || ||||||||||| |||| ||| |
Sbjct 304793 CGGCCTTTTCTTTAATACATGGAATGTTTTCAATGGCATTGAATAAGAATTCCGATTC-C 304735
Query 13917 TTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTT 13975
||| | | ||||| | || || ||||| | |||| || |||| || || |||||||
Sbjct 304734 TTTGGATCCTTGACA--TAGGTGTCAATCAATAAGGAGTATGTTTCCGAATGGATGTTTT 304677
Query 13976 CTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAA 14035
| || || || |||||||| ||||| | ||||| | ||| ||||| | | |
Sbjct 304676 CCATCATGATTTGGAAACCATAGAAACACTTGGCTTCAGGGATTTGCACCTCAGCCGAGA 304617
Query 14036 ATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGT 14095
| |||| |||| ||||| || ||||||||||| ||| |||||||| ||||| |
Sbjct 304616 AGTTTTCAACCAAATTTTCGTTGACAATACCATCTGAAGCAGCAAAAAAGGCCAACACTC 304557
Query 14096 TTTTAATAAAGTATTGCTCTTCATTGTTGAGT---TTTTTCCAATCGGCTAAATCCTTAG 14152
| |||| || || || | || || ||| || ||||| ||| ||| |||||||
Sbjct 304556 TGGTAATGAAAAATCTTTCGTTATCATTTAGTCTGTTGTTCCAGTCGTGTAAGTCCTTAG 304497
Query 14153 AAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATA 14212
| | || | ||| || | ||||| ||| || | || ||||| |||||| ||| |
Sbjct 304496 ACAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGGCCTTTTTGTACATTTGCCAGA 304437
Query 14213 TTTCTTTATATAATATAGGAAAAACTACAAATCTT 14247
|||| | ||| || || || | |||||||||
Sbjct 304436 TTTCATGGTATTTGATTGGGAAGAGCACAAATCTT 304402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478588578652680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |