Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq5 288 9e-73 >seq5 Length=831479 Score = 288 bits (318), Expect = 9e-73 Identities = 596/875 (68%), Gaps = 19/875 (2%) Strand=Plus/Minus Query 13384 ACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCGAAT 13443 ||||| |||||||| ||||| || ||||| | | || || |||||||| ||||| || Sbjct 305268 ACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTTTCCATGAAATCAAAA 305209 Query 13444 GGATTTGTTGACATAAACACT-TTATCACAACCTAGTTCTAATAATAA-TCTATCAGCAA 13501 |||||||| ||| | || || |||||||| || || || || ||| || |||| Sbjct 305208 GGATTTGT-GACGTTGTATCTCTTGTCACAACCAAGAGA-AACAAGAAGTCTGTCGGCAA 305151 Query 13502 TAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTA 13561 ||| || | ||||||| |||| ||||| |||||||| | || || | |||| Sbjct 305150 CAAATTCGACATATTGACACATCAAATCTTTGTTCATACCAAGTAAGTTGGCTGGAAGAG 305091 Query 13562 TATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCTTAATAATGT 13621 | || ||| || || ||| || ||||| || | || || ||| | | | Sbjct 305090 CGTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTTCGATGAT---CTTGAGCACGA 305034 Query 13622 CATTAGAA---GGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAA 13678 || ||| || | || || | ||| || | |||||| |||||||| || | Sbjct 305033 TCTTGGAATCTGGGGTATTGTTCAAATGGGAGAATAATAAACAAGCAAAATCGGTGTGTA 304974 Query 13679 GGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtt 13738 || |||||||| | ||| | |||||| |||||||| || ||||||||||| |||| || Sbjct 304973 AACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAACCTGGCATCAAACCTCTTT 304914 Query 13739 tttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAA 13798 |||| ||||| || || | ||| || |||||||| || || || || ||||| || |||| Sbjct 304913 TTTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAGATACCTTCAACAGCGGCAA 304854 Query 13799 ACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATT 13858 | || | || || ||| || || |||| |||| | | |||||| | | ||||| | Sbjct 304853 AGGCAACTAATCTTTCACCGAATAATGCATTTTCATCGCACATCCATCTCATGGCCCAGT 304794 Query 13859 CAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTCC--TTCTC 13916 | | |||| ||||||| | || |||| || ||||||||||| |||| ||| | Sbjct 304793 CGGCCTTTTCTTTAATACATGGAATGTTTTCAATGGCATTGAATAAGAATTCCGATTC-C 304735 Query 13917 TTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTT 13975 ||| | | ||||| | || || ||||| | |||| || |||| || || ||||||| Sbjct 304734 TTTGGATCCTTGACA--TAGGTGTCAATCAATAAGGAGTATGTTTCCGAATGGATGTTTT 304677 Query 13976 CTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAA 14035 | || || || |||||||| ||||| | ||||| | ||| ||||| | | | Sbjct 304676 CCATCATGATTTGGAAACCATAGAAACACTTGGCTTCAGGGATTTGCACCTCAGCCGAGA 304617 Query 14036 ATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGT 14095 | |||| |||| ||||| || ||||||||||| ||| |||||||| ||||| | Sbjct 304616 AGTTTTCAACCAAATTTTCGTTGACAATACCATCTGAAGCAGCAAAAAAGGCCAACACTC 304557 Query 14096 TTTTAATAAAGTATTGCTCTTCATTGTTGAGT---TTTTTCCAATCGGCTAAATCCTTAG 14152 | |||| || || || | || || ||| || ||||| ||| ||| ||||||| Sbjct 304556 TGGTAATGAAAAATCTTTCGTTATCATTTAGTCTGTTGTTCCAGTCGTGTAAGTCCTTAG 304497 Query 14153 AAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATA 14212 | | || | ||| || | ||||| ||| || | || ||||| |||||| ||| | Sbjct 304496 ACAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGGCCTTTTTGTACATTTGCCAGA 304437 Query 14213 TTTCTTTATATAATATAGGAAAAACTACAAATCTT 14247 |||| | ||| || || || | ||||||||| Sbjct 304436 TTTCATGGTATTTGATTGGGAAGAGCACAAATCTT 304402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588578652680